Os08g0446200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor-like protein kinase precursor (EC 2.7.1.37). Splice isoform INRPK1a.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0446200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Receptor-like protein kinase precursor (EC 2.7.1.37). Splice isoform INRPK1a.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 175.53 | 0.622 | 7.29 | -2.51 | 0.585 | 0.229 | 1.87 | 10.4 | -0.285 | 2.08 | 31.2 | 1781 | -- | -- |
| 184.45 | 0.633 | 7.45 | -3.77 | 0.576 | 1.22 | 2.12 | -- | -0.223 | 2.17 | 32.54 | 2644 | -- | -- |
| 188.67 | 0.64 | 7.29 | -2.48 | 0.581 | 0.195 | -- | 10.8 | -0.284 | 2.2 | 31.2 | 1779 | -- | -- |
| 193.84 | 0.648 | 7.45 | -3.88 | 0.524 | 1.25 | -- | -- | -0.269 | 2.32 | 32.6 | 2640 | -- | -- |
| 202.91 | 0.663 | 7.23 | -2.11 | -- | -0.0292 | -- | 10.9 | -0.262 | -- | 30.8 | 2597 | -- | -- |
| 234.06 | 0.717 | 7.5 | -3.58 | 0.617 | -- | 1.92 | -- | -0.496 | 1.72 | -- | -- | -- | -- |
| 248.54 | 0.738 | 7.5 | -3.64 | 0.622 | -- | -- | -- | -0.508 | 1.96 | -- | -- | -- | -- |
| 207.94 | 0.672 | 7.44 | -3.95 | -- | 1.34 | -- | -- | -0.269 | -- | 32.5 | 2640 | -- | -- |
| 585.32 | 1.13 | 7.39 | -- | 0.49 | 0.581 | -- | -- | 5.22e-05 | 1.9 | 34.8 | 4052 | -- | -- |
| 271.86 | 0.77 | 7.49 | -3.62 | -- | -- | -- | -- | -0.493 | -- | -- | -- | -- | -- |
| 598.31 | 1.14 | 7.41 | -- | 0.555 | -- | -- | -- | -0.102 | 1.79 | -- | -- | -- | -- |
| 599.03 | 1.14 | 7.38 | -- | -- | 0.648 | -- | -- | 0.0306 | -- | 33.52 | 1657 | -- | -- |
| 616.99 | 1.16 | 7.4 | -- | -- | -- | -- | -- | -0.0918 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 174.27 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 3 | 174.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 4 | 175.05 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 7 | 175.19 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 10 | 175.26 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 6 |
| 11 | 175.26 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 15 |
| 12 | 175.27 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 13 |
| 16 | 175.28 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 9 |
| 23 | 175.33 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 27 | 175.46 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 30 | 175.55 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 39 | 175.65 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 80 | 175.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 86 | 176.00 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 103 | 176.03 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 145 | 176.40 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 170 | 176.51 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 188 | 176.63 | temperature | 30 | 1440 | < th | dose independent | sin | 8 | NA |
| 207 | 176.74 | temperature | 30 | 1440 | > th | dose dependent | sin | 6 | NA |
| 208 | 176.76 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 213 | 176.83 | temperature | 30 | 1440 | > th | dose independent | sin | 8 | NA |
| 224 | 177.10 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 229 | 177.20 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 264 | 177.32 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 284 | 177.60 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 17 |
| 323 | 177.99 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 325 | 178.06 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 370 | 178.15 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 391 | 178.24 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 478 | 178.24 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 484 | 178.25 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 542 | 178.38 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 569 | 178.64 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 599 | 179.03 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 665 | 180.27 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 708 | 180.74 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 725 | 180.80 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 819 | 180.84 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 845 | 181.00 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 863 | 181.08 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 903 | 181.43 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 21 |
| 904 | 181.43 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 909 | 181.44 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 912 | 181.44 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 16 |
| 942 | 181.46 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |