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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0444500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.027) R2 : 0.000833
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0351 (0.0569) R2dN8 : 0.00108 R2N8 : 0.000833
σ : 0.509
deviance : 118.88
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
92.56 0.452 2.96 -0.3 0.153 1.72 -1.27 -1.19 0.0649 3.57 94.77 314 -- --
92.8 0.449 2.96 -0.308 0.176 1.87 -1.33 -- 0.0479 3.84 94.88 315 -- --
94.02 0.452 2.96 -0.321 0.114 1.43 -- -4.96 0.0469 2.39 94.74 186 -- --
98 0.461 2.95 -0.272 0.188 1.91 -- -- 0.0565 3.72 94.94 315 -- --
94.56 0.453 2.96 -0.288 -- 1.36 -- -5.05 0.0672 -- 94.72 168 -- --
106.77 0.484 2.97 -0.313 0.291 -- -1.43 -- -0.0121 4.29 -- -- -- --
112.26 0.496 2.96 -0.299 0.29 -- -- -- -0.00437 4.9 -- -- -- --
99.63 0.465 2.95 -0.282 -- 2.02 -- -- 0.0679 -- 94.87 308 -- --
99.97 0.466 2.95 -- 0.193 1.95 -- -- 0.0749 3.56 94.96 316 -- --
116.69 0.505 2.97 -0.288 -- -- -- -- 0.0031 -- -- -- -- --
114.62 0.501 2.96 -- 0.284 -- -- -- 0.0289 4.94 -- -- -- --
101.68 0.47 2.95 -- -- 2.04 -- -- 0.0967 -- 94.89 311 -- --
118.88 0.509 2.96 -- -- -- -- -- 0.0351 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 87.13 wind 1.0 10 < th dose independent rect. 2 2
2 87.33 precipitation 0.1 270 > th dose independent rect. 2 1
3 87.33 precipitation 0.1 270 > th dose dependent rect. 2 1
5 87.54 radiation 1.0 1440 < th dose independent rect. 11 1
6 87.54 radiation 1.0 1440 < th dose dependent rect. 11 1
9 90.02 wind 1.0 30 < th dose dependent rect. 2 2
11 92.46 wind 1.0 270 < th dose dependent rect. 24 1
23 94.08 radiation 1.0 1440 < th dose independent rect. 11 4
24 94.08 radiation 1.0 1440 < th dose dependent rect. 11 4
27 94.22 radiation 1.0 1440 > th dose independent rect. 12 3
65 94.84 radiation 1.0 1440 > th dose independent rect. 9 6
66 94.85 temperature 20.0 10 > th dose independent rect. 2 1
67 94.91 precipitation 0.1 10 > th dose independent rect. 3 1
73 94.91 precipitation 0.1 10 > th dose dependent rect. 3 1
91 95.22 atmosphere 1015.0 30 < th dose dependent rect. 2 1
95 95.30 atmosphere 1000.0 30 > th dose independent rect. 2 1
96 95.31 temperature 10.0 30 > th dose dependent rect. 2 1
97 95.33 wind 9.0 30 < th dose independent rect. 2 1
98 95.33 temperature 10.0 30 > th dose independent rect. 2 1
100 95.33 temperature 30.0 30 < th dose independent rect. 2 1
101 95.33 humidity 50.0 30 > th dose independent rect. 2 1
105 95.33 atmosphere 1010.0 30 < th dose independent rect. 2 1
107 95.33 radiation 1.0 30 < th dose independent rect. 2 1
112 95.33 precipitation 0.1 30 < th dose independent rect. 2 1
114 95.33 temperature 10.0 30 > th dose independent rect. 3 23
116 95.33 radiation 1.0 30 < th dose dependent rect. 2 1
121 95.33 precipitation 0.1 30 < th dose dependent rect. 2 1
123 95.35 humidity 50.0 30 > th dose dependent rect. 2 1
127 95.41 wind 9.0 30 < th dose dependent rect. 2 1
136 95.49 wind 1.0 30 > th dose independent rect. 2 1
138 95.49 atmosphere 995.0 30 > th dose dependent rect. 2 1
148 95.69 temperature 30.0 30 < th dose dependent rect. 2 1
199 96.25 radiation 1.0 1440 > th dose independent rect. 9 1
236 96.86 atmosphere 1005.0 10 < th dose dependent rect. 1 6
299 97.32 wind 1.0 270 < th dose independent rect. 24 1
316 97.41 humidity 90.0 720 > th dose dependent rect. 20 1
318 97.46 wind 1.0 10 < th dose independent rect. 2 11
326 97.65 wind 9.0 30 < th dose independent rect. 3 23
327 97.66 atmosphere 1005.0 270 < th dose dependent rect. 1 1
330 97.73 wind 1.0 10 < th dose independent rect. 2 16
334 97.74 temperature 25.0 10 < th dose independent rect. 24 7
335 97.74 wind 1.0 10 < th dose independent rect. 2 14
353 98.08 temperature 20.0 10 > th dose independent rect. 1 5
364 98.10 wind 1.0 90 < th dose dependent rect. 9 1
372 98.22 wind 1.0 10 > th dose independent rect. 6 23
436 98.43 wind 1.0 90 < th dose independent rect. 8 2
442 98.52 humidity 60.0 14400 > th dose independent rect. 22 10
443 98.54 temperature 20.0 90 > th dose independent rect. 1 5
452 98.70 wind 1.0 10 > th dose independent rect. 21 13
457 98.73 humidity 60.0 14400 > th dose independent rect. 24 8
463 98.75 wind 1.0 10 < th dose independent rect. 14 15
465 98.75 wind 1.0 10 < th dose independent rect. 11 18
485 98.84 wind 1.0 1440 > th dose independent rect. 23 1
486 98.85 wind 1.0 10 > th dose independent sin 6 NA
490 98.87 humidity 60.0 14400 > th dose independent rect. 7 1
499 98.99 humidity 60.0 14400 > th dose independent rect. 20 12
501 99.01 wind 1.0 10 < th dose independent rect. 7 22
509 99.09 atmosphere 1010.0 90 > th dose independent rect. 24 9
513 99.10 atmosphere 1010.0 90 > th dose independent rect. 8 1
514 99.10 atmosphere 1010.0 10 > th dose independent rect. 9 1
575 99.17 humidity 60.0 14400 < th dose independent rect. 6 1
577 99.17 humidity 60.0 14400 < th dose independent rect. 20 1
579 99.17 radiation 20.0 14400 > th dose independent rect. 17 1
631 99.17 wind 1.0 10 > th dose independent rect. 3 23
632 99.17 humidity 60.0 14400 < th dose dependent rect. 6 1
634 99.17 humidity 60.0 14400 < th dose dependent rect. 20 1
636 99.17 radiation 20.0 14400 > th dose dependent rect. 17 1
697 99.22 humidity 60.0 14400 > th dose independent rect. 5 3
713 99.24 wind 3.0 720 < th dose independent rect. 21 2
715 99.24 radiation 10.0 43200 < th dose dependent rect. 3 1
720 99.25 precipitation 0.1 30 < th dose independent sin 2 NA
722 99.25 precipitation 0.1 30 < th dose dependent sin 2 NA
731 99.30 humidity 90.0 10 > th dose independent rect. 1 5
732 99.30 temperature 15.0 10 > th dose dependent rect. 1 3
745 99.35 wind 9.0 1440 < th dose independent rect. 3 1
746 99.35 temperature 10.0 1440 > th dose independent rect. 3 1
749 99.35 temperature 30.0 1440 < th dose independent rect. 3 1
753 99.35 humidity 50.0 1440 > th dose independent rect. 3 1
762 99.35 atmosphere 995.0 1440 > th dose independent rect. 3 1
763 99.35 radiation 1.0 1440 < th dose independent rect. 3 1
784 99.35 temperature 10.0 1440 > th dose independent rect. 4 23
788 99.35 radiation 1.0 1440 < th dose dependent rect. 3 1
806 99.40 precipitation 0.1 30 > th dose independent sin 2 NA
814 99.42 precipitation 0.1 30 > th dose dependent sin 2 NA
820 99.44 humidity 90.0 10 > th dose dependent rect. 1 17
827 99.46 humidity 90.0 10 > th dose dependent rect. 1 11
839 99.49 wind 1.0 10 > th dose independent rect. 21 23
855 99.52 atmosphere 1005.0 720 > th dose independent rect. 21 3
890 99.59 humidity 90.0 10 > th dose dependent rect. 1 5
894 99.60 atmosphere 1015.0 30 < th dose independent rect. 6 19
944 99.69 wind 5.0 720 < th dose dependent rect. 21 2
964 99.73 humidity 90.0 10 > th dose independent rect. 1 17
970 99.75 wind 1.0 10 < th dose independent sin 7 NA