Os08g0444100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Splicing factor 3b, subunit 5 (Splicing factor 3B subunit 10).
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Os08g0444100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Splicing factor 3b, subunit 5 (Splicing factor 3B subunit 10).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.04 | 0.244 | 11.4 | 0.679 | 0.228 | 0.663 | -0.147 | 0.393 | 0.0841 | 9.64 | 25.17 | 10 | -- | -- |
| 27.03 | 0.244 | 11.4 | 0.746 | 0.238 | 0.649 | -0.245 | -- | 0.112 | 10.5 | 27 | 20 | -- | -- |
| 27.11 | 0.242 | 11.4 | 0.664 | 0.228 | 0.67 | -- | 0.472 | 0.0802 | 9.62 | 25.13 | 9 | -- | -- |
| 27.27 | 0.243 | 11.4 | 0.742 | 0.238 | 0.649 | -- | -- | 0.111 | 10.5 | 27.05 | 20 | -- | -- |
| 28.25 | 0.248 | 11.4 | 0.659 | -- | 0.673 | -- | 0.328 | 0.0779 | -- | 25.6 | 430 | -- | -- |
| 33.39 | 0.271 | 11.4 | 0.586 | 0.192 | -- | -0.12 | -- | -0.0311 | 7.34 | -- | -- | -- | -- |
| 33.43 | 0.271 | 11.4 | 0.583 | 0.193 | -- | -- | -- | -0.0311 | 7.15 | -- | -- | -- | -- |
| 28.11 | 0.247 | 11.4 | 0.74 | -- | 0.693 | -- | -- | 0.0714 | -- | 37.38 | 465 | -- | -- |
| 40.25 | 0.297 | 11.4 | -- | 0.2 | 0.363 | -- | -- | -0.0261 | 8.96 | 27.05 | 20 | -- | -- |
| 35.39 | 0.278 | 11.4 | 0.586 | -- | -- | -- | -- | -0.0277 | -- | -- | -- | -- | -- |
| 42.38 | 0.305 | 11.4 | -- | 0.199 | -- | -- | -- | -0.096 | 6.96 | -- | -- | -- | -- |
| 41.32 | 0.299 | 11.4 | -- | -- | 0.439 | -- | -- | -0.0413 | -- | 63.71 | 429 | -- | -- |
| 44.46 | 0.311 | 11.4 | -- | -- | -- | -- | -- | -0.0928 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.47 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 4 | 24.55 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 7 | 24.71 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 20 |
| 9 | 24.88 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 23 | 25.13 | temperature | 20.0 | 10 | > th | dose independent | rect. | 15 | 17 |
| 24 | 25.14 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 25 | 25.18 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 32 | 25.27 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 4 |
| 36 | 25.30 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 44 | 25.33 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 61 | 25.45 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 10 |
| 66 | 25.48 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 8 |
| 88 | 25.56 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 89 | 25.56 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 128 | 25.57 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 3 |
| 194 | 25.63 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 7 |
| 195 | 25.64 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 201 | 25.65 | wind | 9.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 220 | 25.68 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 13 |
| 223 | 25.70 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 227 | 25.71 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 8 |
| 250 | 25.74 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 285 | 25.85 | wind | 9.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 294 | 25.88 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 313 | 25.90 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 17 |
| 351 | 25.97 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 359 | 25.99 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 382 | 26.03 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 411 | 26.09 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 423 | 26.12 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 427 | 26.13 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 21 |
| 482 | 26.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 504 | 26.30 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 22 |
| 563 | 26.49 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 23 |
| 573 | 26.52 | wind | 9.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 574 | 26.52 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 581 | 26.54 | wind | 9.0 | 4320 | < th | dose independent | rect. | 15 | 11 |
| 582 | 26.54 | wind | 9.0 | 4320 | < th | dose independent | rect. | 15 | 13 |
| 584 | 26.55 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 589 | 26.55 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 3 | 12 |
| 596 | 26.57 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 626 | 26.62 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 627 | 26.63 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 639 | 26.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 659 | 26.68 | wind | 9.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 674 | 26.70 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 679 | 26.70 | temperature | 20.0 | 720 | > th | dose independent | rect. | 7 | 17 |
| 688 | 26.71 | wind | 9.0 | 4320 | > th | dose independent | rect. | 15 | 13 |
| 698 | 26.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 704 | 26.73 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 712 | 26.74 | wind | 9.0 | 4320 | > th | dose independent | rect. | 15 | 8 |
| 748 | 26.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 18 |
| 761 | 26.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 770 | 26.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 783 | 26.79 | temperature | 20.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 808 | 26.82 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 817 | 26.83 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 825 | 26.84 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 857 | 26.87 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 875 | 26.88 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 893 | 26.90 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 3 | 12 |
| 907 | 26.91 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 911 | 26.91 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 925 | 26.92 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 926 | 26.92 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 932 | 26.93 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 7 | NA |