Os08g0441500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cinnamoyl-CoA reductase.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0441500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cinnamoyl-CoA reductase.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 432.61 | 0.977 | 11.2 | 2.5 | 1.58 | -2.02 | 1.38 | -2.85 | 1.35 | 9.22 | 23.9 | 4798 | -- | -- |
| 436.08 | 0.973 | 11.1 | 3.26 | 1.56 | -2.29 | 1.45 | -- | 1.5 | 9.26 | 24.3 | 4830 | -- | -- |
| 439.15 | 0.976 | 11.2 | 2.5 | 1.56 | -2.01 | -- | -3.03 | 1.32 | 9.23 | 24.2 | 4847 | -- | -- |
| 442.81 | 0.98 | 11.1 | 3.3 | 1.55 | -2.28 | -- | -- | 1.5 | 9.27 | 24.4 | 4835 | -- | -- |
| 571.66 | 1.11 | 11.2 | 2.65 | -- | -2.28 | -- | -2.68 | 1.31 | -- | 24.68 | 5057 | -- | -- |
| 601.19 | 1.15 | 11.1 | 2.41 | 1.72 | -- | 1.57 | -- | 1.32 | 9.28 | -- | -- | -- | -- |
| 610.02 | 1.16 | 11.1 | 2.47 | 1.71 | -- | -- | -- | 1.32 | 9.29 | -- | -- | -- | -- |
| 557.27 | 1.1 | 11.1 | 3.31 | -- | -2.64 | -- | -- | 1.75 | -- | 24.3 | 2153 | -- | -- |
| 681.64 | 1.22 | 11.2 | -- | 1.64 | -1.48 | -- | -- | 0.957 | 8.98 | 28.34 | 4991 | -- | -- |
| 780.64 | 1.31 | 11.2 | 2.46 | -- | -- | -- | -- | 1.33 | -- | -- | -- | -- | -- |
| 770.36 | 1.3 | 11.2 | -- | 1.71 | -- | -- | -- | 1.04 | 9.18 | -- | -- | -- | -- |
| 762.71 | 1.29 | 11.2 | -- | -- | -2.45 | -- | -- | 1.22 | -- | 24.5 | 695 | -- | -- |
| 940.11 | 1.43 | 11.2 | -- | -- | -- | -- | -- | 1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 425.31 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 2 | 426.41 | temperature | 25 | 4320 | > th | dose independent | sin | 12 | NA |
| 3 | 426.57 | temperature | 25 | 4320 | > th | dose independent | rect. | 15 | 16 |
| 7 | 426.97 | temperature | 25 | 4320 | < th | dose independent | sin | 11 | NA |
| 8 | 426.98 | temperature | 25 | 4320 | < th | dose independent | rect. | 15 | 16 |
| 66 | 429.01 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 14 |
| 71 | 429.15 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 14 |
| 208 | 433.30 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 334 | 436.03 | temperature | 25 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 341 | 436.18 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 8 |
| 345 | 436.29 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 10 |
| 363 | 436.60 | temperature | 25 | 4320 | > th | dose dependent | sin | 11 | NA |
| 384 | 437.29 | temperature | 25 | 4320 | < th | dose independent | no | NA | NA |
| 394 | 437.56 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 17 |
| 404 | 437.68 | temperature | 25 | 4320 | > th | dose independent | no | NA | NA |
| 429 | 438.05 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 23 |
| 433 | 438.11 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 23 |
| 435 | 438.13 | temperature | 25 | 4320 | > th | dose independent | rect. | 2 | 6 |
| 444 | 438.37 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 23 |
| 448 | 438.46 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 9 |
| 465 | 438.68 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 23 |
| 467 | 438.72 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 4 |
| 523 | 439.34 | radiation | 20 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 578 | 439.94 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 16 |
| 598 | 440.10 | radiation | 20 | 4320 | > th | dose dependent | rect. | 15 | 16 |
| 735 | 441.13 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 746 | 441.17 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 23 |
| 747 | 441.18 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 3 |
| 755 | 441.20 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 10 |
| 760 | 441.21 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 20 |
| 774 | 441.24 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 858 | 441.50 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 965 | 441.87 | temperature | 15 | 4320 | > th | dose dependent | rect. | 13 | 8 |
| 994 | 441.98 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |