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Os08g0441400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0103) R2 : 0.0394
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0939 (0.0217) R2dN8 : 0.0509 R2N8 : 0.0394
σ : 0.194
deviance : 17.31
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.62 0.173 10.9 -0.0197 0.205 0.182 -0.365 -0.652 -0.088 17.4 9.99 272 -- --
14.7 0.18 10.9 -0.0157 0.144 0.0188 -0.509 -- -0.0955 21.8 9.99 272 -- --
13.95 0.174 10.9 -0.0202 0.205 0.184 -- -0.65 -0.0876 17.4 9.981 273 -- --
15 0.18 10.8 0.00707 0.206 0.204 -- -- -0.087 17.5 9.98 319 -- --
15.05 0.182 10.8 -0.0252 -- 0.11 -- -0.505 -0.0998 -- 19.98 122 -- --
14.72 0.18 10.9 -0.0143 0.16 -- -0.51 -- -0.0941 21.9 -- -- -- --
15.68 0.185 10.9 0.00651 0.167 -- -- -- -0.0924 21.3 -- -- -- --
16.12 0.187 10.8 0.00831 -- 0.184 -- -- -0.0907 -- 36.24 113 -- --
14.97 0.18 10.8 -- 0.223 0.216 -- -- -0.091 17.6 9.993 339 -- --
17.31 0.194 10.8 0.00723 -- -- -- -- -0.0931 -- -- -- -- --
15.69 0.185 10.9 -- 0.167 -- -- -- -0.0931 21.3 -- -- -- --
15.55 0.184 10.8 -- -- 0.401 -- -- -0.0713 -- 59.63 430 -- --
17.31 0.194 10.8 -- -- -- -- -- -0.0939 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.96 radiation 40 10 < th dose dependent rect. 6 6
2 12.98 radiation 40 10 < th dose dependent rect. 6 8
4 13.00 temperature 30 90 < th dose independent rect. 14 15
5 13.04 radiation 30 10 < th dose independent rect. 6 8
7 13.05 radiation 30 10 < th dose independent rect. 6 6
9 13.05 radiation 40 10 < th dose dependent rect. 6 20
11 13.06 temperature 30 270 < th dose independent rect. 11 17
13 13.08 radiation 30 10 < th dose independent rect. 6 20
22 13.12 humidity 50 10 > th dose dependent rect. 14 16
28 13.18 temperature 30 10 < th dose independent rect. 14 16
29 13.18 radiation 10 270 < th dose independent rect. 3 22
31 13.20 radiation 30 10 < th dose independent rect. 6 18
32 13.20 radiation 10 270 < th dose independent rect. 4 20
43 13.22 humidity 50 90 > th dose independent rect. 14 15
64 13.28 radiation 40 10 < th dose dependent rect. 6 18
67 13.29 humidity 60 10 > th dose independent rect. 14 16
68 13.29 radiation 30 10 < th dose independent rect. 6 16
79 13.31 radiation 30 10 < th dose independent rect. 17 21
91 13.33 temperature 30 10 < th dose independent rect. 11 19
103 13.35 radiation 30 10 < th dose independent rect. 17 19
113 13.36 radiation 10 270 < th dose independent rect. 5 17
114 13.36 radiation 40 270 < th dose dependent rect. 4 8
124 13.38 radiation 20 10 < th dose independent rect. 6 4
138 13.39 temperature 20 30 > th dose independent rect. 22 8
146 13.39 radiation 30 270 < th dose dependent rect. 5 6
160 13.40 radiation 30 270 < th dose dependent rect. 3 22
219 13.44 temperature 10 10 > th dose dependent rect. 22 8
248 13.47 humidity 50 270 > th dose independent rect. 7 23
251 13.47 humidity 70 10 > th dose dependent rect. 22 8
256 13.47 radiation 40 10 < th dose dependent rect. 17 21
261 13.48 humidity 50 270 > th dose independent rect. 11 17
267 13.48 humidity 70 10 > th dose dependent rect. 18 12
284 13.49 radiation 1 90 > th dose independent rect. 16 22
294 13.49 radiation 40 270 < th dose dependent rect. 5 17
303 13.50 temperature 30 270 < th dose independent rect. 9 8
319 13.50 temperature 10 10 > th dose dependent rect. 6 16
323 13.51 temperature 25 10 > th dose independent rect. 6 3
328 13.51 radiation 10 30 < th dose independent rect. 9 17
340 13.51 radiation 40 10 < th dose dependent rect. 6 16
348 13.52 wind 3 14400 > th dose independent rect. 20 1
355 13.52 temperature 30 270 < th dose independent rect. 7 22
365 13.52 radiation 40 10 < th dose dependent rect. 17 19
367 13.53 humidity 80 10 > th dose independent rect. 22 8
369 13.53 atmosphere 1015 10 < th dose independent rect. 22 8
372 13.53 radiation 10 270 < th dose independent rect. 5 13
377 13.53 radiation 10 270 < th dose independent rect. 14 21
382 13.53 temperature 20 720 > th dose dependent rect. 6 1
383 13.53 wind 5 14400 < th dose dependent rect. 20 2
385 13.53 humidity 50 10 > th dose dependent rect. 6 8
414 13.54 radiation 40 10 < th dose dependent rect. 8 18
428 13.55 humidity 80 10 > th dose independent rect. 16 14
451 13.56 temperature 30 720 > th dose independent rect. 15 1
476 13.57 wind 3 14400 < th dose independent rect. 20 1
492 13.57 wind 7 10 < th dose dependent rect. 22 8
527 13.58 temperature 25 10 > th dose dependent rect. 17 16
536 13.59 humidity 70 90 > th dose independent rect. 5 8
547 13.59 radiation 10 270 < th dose independent rect. 9 23
549 13.59 wind 1 14400 > th dose dependent rect. 20 2
550 13.59 temperature 30 720 > th dose dependent rect. 13 3
582 13.60 wind 1 270 > th dose independent rect. 17 14
587 13.60 wind 1 270 > th dose independent rect. 4 18
589 13.60 radiation 20 270 < th dose independent rect. 17 18
603 13.60 temperature 30 720 > th dose dependent rect. 14 1
604 13.60 wind 7 43200 > th dose dependent rect. 18 2
619 13.61 atmosphere 1000 10 > th dose independent rect. 6 8
629 13.61 radiation 30 10 < th dose independent rect. 19 17
630 13.61 temperature 30 270 < th dose independent rect. 23 18
632 13.61 humidity 50 270 > th dose independent rect. 9 20
635 13.61 temperature 30 270 < th dose independent rect. 22 21
649 13.62 humidity 70 43200 < th dose independent rect. 19 1
657 13.62 humidity 80 43200 > th dose independent rect. 4 12
707 13.62 radiation 40 10 < th dose dependent rect. 8 16
716 13.62 radiation 1 270 > th dose dependent rect. 9 21
718 13.62 radiation 1 270 > th dose dependent rect. 9 23
720 13.63 radiation 10 270 < th dose independent sin 21 NA
723 13.63 radiation 10 270 < th dose independent no NA NA
724 13.63 humidity 70 43200 > th dose independent rect. 19 1
725 13.63 wind 9 43200 < th dose independent rect. 18 2
730 13.63 humidity 80 270 > th dose independent rect. 19 9
734 13.63 radiation 30 10 < th dose independent rect. 6 12
757 13.63 temperature 20 270 > th dose dependent rect. 4 5
760 13.63 radiation 1 270 > th dose dependent rect. 9 8
772 13.63 radiation 30 270 < th dose dependent rect. 14 21
786 13.64 humidity 80 43200 > th dose independent rect. 5 10
833 13.65 wind 9 43200 > th dose independent rect. 18 2
836 13.65 atmosphere 1000 10 > th dose independent rect. 22 8
838 13.65 atmosphere 1010 10 < th dose independent rect. 22 10
846 13.65 radiation 20 270 > th dose independent rect. 16 15
850 13.65 radiation 30 10 < th dose independent rect. 8 16
851 13.65 radiation 20 90 < th dose independent rect. 19 16
902 13.66 radiation 20 270 > th dose independent rect. 16 1
910 13.66 humidity 80 270 > th dose independent rect. 22 6
930 13.66 humidity 80 43200 < th dose independent rect. 3 14
936 13.66 radiation 10 30 < th dose independent rect. 9 15
947 13.66 radiation 20 10 < th dose independent rect. 17 17
948 13.66 temperature 25 30 < th dose independent rect. 2 18
998 13.67 humidity 50 1440 < th dose independent rect. 16 1