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Os08g0440000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Vesicle transport v-SNARE family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0162) R2 : 0.14
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.295 (0.0342) R2dN8 : 0.181 R2N8 : 0.14
σ : 0.306
deviance : 42.94
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.94 0.255 10.9 0.412 0.226 -0.266 -0.0897 0.146 0.295 7.52 20 30 -- --
30.05 0.255 10.9 0.436 0.228 -0.276 -0.0978 -- 0.3 7.48 19.92 30 -- --
29.96 0.255 10.9 0.411 0.226 -0.264 -- 0.15 0.296 7.67 20 30 -- --
30.07 0.255 10.9 0.435 0.227 -0.274 -- -- 0.301 7.61 19.96 30 -- --
32.7 0.266 10.9 0.41 -- -0.274 -- 0.163 0.296 -- 19.99 30 -- --
32.94 0.269 10.8 0.507 0.24 -- -0.0444 -- 0.349 8.53 -- -- -- --
32.95 0.269 10.8 0.506 0.239 -- -- -- 0.349 8.59 -- -- -- --
32.84 0.267 10.9 0.436 -- -0.284 -- -- 0.303 -- 19.9 30 -- --
34.2 0.272 10.9 -- 0.271 -0.418 -- -- 0.238 7.71 19.91 294 -- --
36.17 0.281 10.9 0.507 -- -- -- -- 0.351 -- -- -- -- --
39.69 0.295 10.9 -- 0.241 -- -- -- 0.293 8.44 -- -- -- --
34.85 0.275 10.9 -- -- -0.649 -- -- 0.213 -- 18.2 8663 -- --
42.94 0.306 10.9 -- -- -- -- -- 0.295 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.72 temperature 20 90 > th dose independent rect. 15 17
4 28.78 temperature 20 270 > th dose independent rect. 13 18
11 28.98 wind 1 43200 < th dose dependent rect. 2 6
21 29.08 wind 1 43200 < th dose dependent rect. 2 1
26 29.13 temperature 15 90 > th dose dependent rect. 15 16
28 29.14 temperature 15 10 > th dose dependent rect. 16 15
29 29.16 temperature 20 270 > th dose independent rect. 2 17
31 29.16 temperature 15 10 > th dose dependent rect. 16 17
35 29.19 wind 1 14400 > th dose independent rect. 2 1
38 29.20 wind 1 43200 > th dose independent rect. 2 6
45 29.23 humidity 70 43200 > th dose dependent rect. 20 2
47 29.24 humidity 80 43200 > th dose independent rect. 15 10
51 29.26 wind 1 43200 < th dose independent rect. 2 1
53 29.28 humidity 80 43200 > th dose independent rect. 14 12
55 29.29 atmosphere 1000 270 > th dose independent rect. 2 16
62 29.34 humidity 70 43200 > th dose dependent rect. 19 4
87 29.41 humidity 80 43200 < th dose independent rect. 15 10
90 29.42 wind 1 43200 > th dose independent rect. 4 3
92 29.43 wind 1 43200 < th dose independent rect. 2 6
93 29.43 humidity 70 14400 > th dose independent rect. 21 6
94 29.43 humidity 80 43200 < th dose independent rect. 14 12
97 29.44 atmosphere 1000 30 > th dose independent rect. 4 15
102 29.45 humidity 80 43200 > th dose independent rect. 6 1
105 29.47 humidity 80 43200 < th dose independent rect. 6 2
113 29.48 temperature 20 270 > th dose independent rect. 24 21
127 29.51 wind 1 43200 < th dose independent rect. 4 4
147 29.54 humidity 80 43200 > th dose independent sin 16 NA
149 29.54 wind 1 43200 > th dose independent rect. 23 6
167 29.57 temperature 20 30 > th dose independent rect. 5 14
178 29.58 wind 1 14400 > th dose dependent rect. 23 1
191 29.61 temperature 20 30 > th dose independent rect. 13 23
214 29.64 humidity 80 43200 < th dose independent sin 16 NA
221 29.64 radiation 20 14400 > th dose dependent rect. 17 14
223 29.64 temperature 25 30 < th dose dependent rect. 9 19
237 29.66 radiation 20 14400 > th dose dependent rect. 6 1
263 29.68 humidity 90 43200 < th dose dependent rect. 19 3
276 29.70 temperature 20 270 < th dose independent rect. 6 21
281 29.71 humidity 70 14400 > th dose independent rect. 21 4
294 29.72 wind 9 14400 < th dose dependent rect. 23 1
295 29.72 wind 1 43200 < th dose dependent rect. 9 2
308 29.74 wind 1 43200 < th dose independent rect. 23 6
314 29.75 wind 1 43200 > th dose independent rect. 14 1
329 29.75 temperature 25 10 < th dose dependent rect. 6 22
354 29.78 atmosphere 1010 4320 > th dose independent rect. 18 1
368 29.79 atmosphere 1010 4320 < th dose independent rect. 18 1
372 29.79 humidity 80 43200 < th dose dependent rect. 7 1
383 29.80 radiation 30 90 < th dose independent rect. 3 16
387 29.80 temperature 30 10 < th dose dependent rect. 19 9
395 29.81 humidity 80 43200 > th dose independent rect. 13 21
409 29.82 atmosphere 1005 4320 > th dose dependent rect. 18 1
410 29.82 temperature 20 1440 < th dose dependent rect. 20 7
436 29.84 temperature 20 4320 > th dose independent rect. 17 2
446 29.84 humidity 80 43200 < th dose independent rect. 13 20
466 29.85 temperature 20 1440 < th dose dependent rect. 23 2
482 29.86 radiation 30 10 < th dose independent rect. 4 15
489 29.86 temperature 20 1440 < th dose dependent rect. 21 4
504 29.87 temperature 20 30 < th dose independent rect. 6 22
518 29.87 temperature 25 90 < th dose dependent rect. 11 16
522 29.88 radiation 10 14400 > th dose independent rect. 5 1
542 29.88 temperature 20 1440 < th dose dependent rect. 23 4
545 29.88 radiation 10 4320 < th dose dependent rect. 20 9
551 29.89 wind 1 30 > th dose independent rect. 19 10
558 29.89 humidity 50 43200 > th dose dependent sin 16 NA
589 29.91 temperature 20 4320 < th dose independent rect. 18 1
620 29.92 wind 1 43200 < th dose independent rect. 23 9
642 29.93 wind 1 43200 < th dose independent rect. 14 1
670 29.94 temperature 20 30 < th dose independent no NA NA
684 29.94 temperature 20 30 < th dose independent rect. 9 23
685 29.94 temperature 20 30 < th dose independent rect. 21 23
686 29.94 temperature 20 30 < th dose independent rect. 23 23
705 29.95 temperature 20 270 > th dose independent sin 21 NA
706 29.95 wind 1 43200 < th dose independent rect. 9 2
715 29.95 temperature 20 30 < th dose independent rect. 3 23
716 29.95 temperature 20 30 < th dose independent rect. 11 23
717 29.95 temperature 20 30 < th dose independent rect. 13 23
718 29.95 temperature 20 30 < th dose independent rect. 15 23
719 29.95 temperature 20 30 < th dose independent rect. 17 23
720 29.95 temperature 20 30 < th dose independent rect. 19 23
722 29.95 humidity 90 43200 < th dose dependent sin 16 NA
742 29.96 radiation 20 4320 < th dose independent rect. 17 3
750 29.96 temperature 20 30 < th dose independent rect. 9 17
754 29.96 temperature 20 30 > th dose independent rect. 15 23
755 29.96 temperature 20 30 < th dose independent rect. 1 23
757 29.96 radiation 1 90 < th dose dependent sin 13 NA
815 29.98 temperature 20 1440 < th dose dependent sin 12 NA
819 29.98 radiation 40 270 < th dose dependent sin 7 NA
842 29.99 radiation 20 4320 < th dose independent rect. 17 13
876 30.00 atmosphere 1010 4320 > th dose independent rect. 16 10
917 30.01 temperature 20 30 > th dose independent no NA NA
922 30.01 temperature 20 270 > th dose independent rect. 23 9
947 30.01 humidity 50 43200 < th dose dependent rect. 20 8
973 30.02 atmosphere 1010 4320 > th dose independent rect. 11 16
980 30.02 humidity 80 43200 < th dose independent rect. 19 23
998 30.02 radiation 30 270 < th dose dependent rect. 1 10