Os08g0437200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Typical P-type R2R3 Myb protein (Fragment).
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Os08g0437200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Typical P-type R2R3 Myb protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.03 | 0.423 | 6.31 | 0.413 | 0.356 | 0.984 | 0.2 | -0.368 | 0.335 | 5.95 | 24.8 | 1542 | -- | -- |
| 81.33 | 0.42 | 6.32 | 0.356 | 0.348 | 1.02 | 0.192 | -- | 0.331 | 6.02 | 24.8 | 1544 | -- | -- |
| 81.12 | 0.419 | 6.31 | 0.416 | 0.357 | 0.985 | -- | -0.372 | 0.334 | 5.86 | 24.78 | 1541 | -- | -- |
| 81.4 | 0.42 | 6.32 | 0.355 | 0.358 | 1 | -- | -- | 0.336 | 5.87 | 24.8 | 1541 | -- | -- |
| 85.25 | 0.43 | 6.32 | 0.465 | -- | 1.04 | -- | -0.435 | 0.359 | -- | 24.74 | 1741 | -- | -- |
| 108.27 | 0.488 | 6.4 | -0.0317 | 0.342 | -- | 0.214 | -- | -0.0321 | 6.15 | -- | -- | -- | -- |
| 108.38 | 0.488 | 6.4 | -0.0297 | 0.343 | -- | -- | -- | -0.033 | 6.07 | -- | -- | -- | -- |
| 85.42 | 0.43 | 6.33 | 0.339 | -- | 1.02 | -- | -- | 0.322 | -- | 24.78 | 1741 | -- | -- |
| 83.46 | 0.425 | 6.34 | -- | 0.366 | 0.878 | -- | -- | 0.242 | 5.78 | 24.8 | 1532 | -- | -- |
| 114.47 | 0.5 | 6.41 | -0.0199 | -- | -- | -- | -- | -0.0252 | -- | -- | -- | -- | -- |
| 108.4 | 0.487 | 6.4 | -- | 0.342 | -- | -- | -- | -0.0296 | 6.07 | -- | -- | -- | -- |
| 88.04 | 0.437 | 6.34 | -- | -- | 0.896 | -- | -- | 0.272 | -- | 24.7 | 1741 | -- | -- |
| 114.48 | 0.499 | 6.41 | -- | -- | -- | -- | -- | -0.023 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.57 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 19 | 80.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 20 | 80.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 26 | 80.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 32 | 81.03 | temperature | 25 | 1440 | < th | dose independent | rect. | 23 | 22 |
| 36 | 81.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 39 | 81.17 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 43 | 81.20 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 44 | 81.24 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 3 |
| 48 | 81.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 53 | 81.28 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 56 | 81.30 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 62 | 81.35 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 87 | 81.48 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 91 | 81.50 | temperature | 25 | 1440 | > th | dose independent | rect. | 23 | 21 |
| 96 | 81.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 98 | 81.53 | temperature | 10 | 270 | > th | dose dependent | sin | 6 | NA |
| 101 | 81.53 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 6 |
| 106 | 81.55 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 6 |
| 115 | 81.57 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 125 | 81.60 | temperature | 10 | 720 | > th | dose dependent | sin | 8 | NA |
| 144 | 81.66 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 159 | 81.70 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 22 |
| 192 | 81.80 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 224 | 81.87 | temperature | 25 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 234 | 81.89 | temperature | 25 | 1440 | < th | dose independent | no | NA | NA |
| 254 | 81.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 7 |
| 258 | 81.93 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 282 | 81.96 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 308 | 82.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 415 | 82.20 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 428 | 82.23 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 21 |
| 431 | 82.23 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 443 | 82.25 | temperature | 25 | 1440 | < th | dose independent | rect. | 24 | 15 |
| 445 | 82.25 | temperature | 30 | 270 | < th | dose dependent | sin | 6 | NA |
| 450 | 82.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 18 |
| 499 | 82.32 | temperature | 25 | 1440 | < th | dose independent | rect. | 1 | 13 |
| 513 | 82.33 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 555 | 82.38 | temperature | 25 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 568 | 82.38 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 574 | 82.40 | temperature | 25 | 1440 | > th | dose independent | no | NA | NA |
| 575 | 82.40 | temperature | 25 | 1440 | < th | dose independent | sin | 4 | NA |
| 668 | 82.49 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 690 | 82.51 | temperature | 30 | 4320 | < th | dose dependent | sin | 12 | NA |
| 728 | 82.53 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 747 | 82.55 | temperature | 10 | 4320 | > th | dose dependent | sin | 11 | NA |
| 814 | 82.59 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 865 | 82.62 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 868 | 82.63 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 17 |