Os08g0436100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nucleoside phosphatase GDA1/CD39 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0436100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Nucleoside phosphatase GDA1/CD39 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.66 | 0.167 | 10.7 | -0.278 | 0.548 | -0.502 | -0.0379 | 0.221 | -0.0382 | 7.56 | 81.98 | 35 | -- | -- |
| 12.75 | 0.166 | 10.7 | -0.279 | 0.547 | -0.496 | -0.00749 | -- | -0.0379 | 7.59 | 82.23 | 33 | -- | -- |
| 12.67 | 0.166 | 10.7 | -0.279 | 0.548 | -0.502 | -- | 0.214 | -0.038 | 7.58 | 82.22 | 34 | -- | -- |
| 12.75 | 0.166 | 10.7 | -0.279 | 0.547 | -0.5 | -- | -- | -0.0383 | 7.61 | 82.54 | 32 | -- | -- |
| 20 | 0.208 | 10.7 | -0.257 | -- | -0.849 | -- | 0.479 | 0.00789 | -- | 217.1 | 372 | -- | -- |
| 16.44 | 0.19 | 10.7 | -0.307 | 0.645 | -- | -0.0145 | -- | -0.0188 | 6.17 | -- | -- | -- | -- |
| 16.44 | 0.19 | 10.7 | -0.307 | 0.645 | -- | -- | -- | -0.0187 | 6.17 | -- | -- | -- | -- |
| 20.28 | 0.21 | 10.7 | -0.285 | -- | -0.815 | -- | -- | 0.00765 | -- | 244.5 | 381 | -- | -- |
| 14.8 | 0.179 | 10.7 | -- | 0.543 | -0.524 | -- | -- | -0.00713 | 7.69 | 82 | 31 | -- | -- |
| 38.03 | 0.288 | 10.7 | -0.289 | -- | -- | -- | -- | -0.00446 | -- | -- | -- | -- | -- |
| 18.93 | 0.204 | 10.7 | -- | 0.641 | -- | -- | -- | 0.0155 | 6.2 | -- | -- | -- | -- |
| 22.42 | 0.221 | 10.7 | -- | -- | -0.816 | -- | -- | 0.0394 | -- | 279.7 | 388 | -- | -- |
| 40.24 | 0.296 | 10.7 | -- | -- | -- | -- | -- | 0.0277 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.05 | humidity | 60 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 3 | 11.07 | humidity | 60 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 4 | 11.09 | humidity | 60 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 5 | 11.16 | humidity | 60 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 12 | 11.31 | humidity | 60 | 270 | > th | dose dependent | rect. | 3 | 12 |
| 24 | 11.41 | humidity | 70 | 90 | > th | dose independent | rect. | 5 | 18 |
| 45 | 11.57 | humidity | 70 | 90 | > th | dose independent | rect. | 5 | 15 |
| 46 | 11.57 | humidity | 60 | 90 | > th | dose dependent | sin | 23 | NA |
| 77 | 11.69 | humidity | 60 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 84 | 11.73 | humidity | 80 | 270 | > th | dose independent | rect. | 3 | 12 |
| 150 | 11.92 | humidity | 90 | 90 | < th | dose dependent | rect. | 9 | 9 |
| 156 | 11.94 | humidity | 90 | 90 | < th | dose dependent | sin | 0 | NA |
| 191 | 12.04 | temperature | 10 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 207 | 12.09 | humidity | 80 | 270 | < th | dose independent | rect. | 7 | 9 |
| 242 | 12.16 | humidity | 90 | 30 | < th | dose dependent | rect. | 9 | 12 |
| 266 | 12.21 | radiation | 1 | 270 | > th | dose independent | rect. | 7 | 10 |
| 276 | 12.23 | humidity | 90 | 270 | < th | dose dependent | sin | 3 | NA |
| 284 | 12.24 | humidity | 80 | 270 | < th | dose independent | sin | 2 | NA |
| 327 | 12.30 | radiation | 20 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 332 | 12.31 | radiation | 20 | 90 | < th | dose dependent | rect. | 5 | 19 |
| 363 | 12.35 | humidity | 90 | 90 | < th | dose dependent | rect. | 24 | 17 |
| 365 | 12.36 | humidity | 80 | 270 | > th | dose independent | sin | 2 | NA |
| 377 | 12.36 | humidity | 90 | 270 | < th | dose dependent | rect. | 24 | 15 |
| 384 | 12.36 | radiation | 20 | 270 | < th | dose dependent | rect. | 2 | 22 |
| 385 | 12.37 | radiation | 1 | 270 | > th | dose independent | sin | 0 | NA |
| 399 | 12.38 | humidity | 90 | 90 | < th | dose dependent | rect. | 2 | 15 |
| 409 | 12.40 | humidity | 70 | 90 | > th | dose independent | sin | 23 | NA |
| 414 | 12.40 | humidity | 80 | 270 | < th | dose independent | rect. | 24 | 16 |
| 419 | 12.40 | radiation | 20 | 270 | < th | dose dependent | rect. | 4 | 17 |
| 424 | 12.41 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 12 |
| 517 | 12.47 | humidity | 80 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 529 | 12.48 | humidity | 80 | 10 | < th | dose dependent | rect. | 9 | 19 |
| 533 | 12.48 | radiation | 30 | 270 | < th | dose dependent | rect. | 12 | 21 |
| 548 | 12.50 | radiation | 1 | 270 | < th | dose independent | sin | 0 | NA |
| 559 | 12.50 | humidity | 80 | 10 | < th | dose dependent | rect. | 9 | 17 |
| 659 | 12.55 | radiation | 20 | 270 | < th | dose dependent | rect. | 4 | 14 |
| 669 | 12.56 | radiation | 1 | 270 | < th | dose independent | rect. | 4 | 16 |
| 697 | 12.57 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 715 | 12.58 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 9 |
| 734 | 12.59 | humidity | 70 | 90 | > th | dose independent | rect. | 1 | 23 |
| 789 | 12.62 | temperature | 30 | 90 | < th | dose independent | rect. | 5 | 18 |
| 790 | 12.62 | humidity | 70 | 90 | > th | dose independent | rect. | 11 | 23 |
| 794 | 12.62 | radiation | 40 | 270 | < th | dose dependent | rect. | 3 | 12 |
| 943 | 12.68 | humidity | 70 | 90 | < th | dose independent | sin | 23 | NA |
| 995 | 12.70 | temperature | 30 | 90 | < th | dose independent | rect. | 5 | 15 |