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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0435700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Myb-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.36 (0.023) R2 : 0.00564
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.078 (0.0485) R2dN8 : 0.00729 R2N8 : 0.00564
σ : 0.434
deviance : 86.4
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
70.6 0.395 3.3 0.175 0.287 0.382 -0.868 -1.66 0.0529 8.16 2.254 7346 -- --
72.7 0.397 3.32 -0.0636 0.132 0.69 -0.85 -- 0.0404 6.81 0.8365 6913 -- --
72.03 0.395 3.3 0.189 0.196 0.335 -- -1.88 0.0555 7.81 2.398 6896 -- --
74.58 0.402 3.34 -0.116 0.151 0.659 -- -- -0.0131 6.42 0.8357 6910 -- --
72.7 0.397 3.31 0.159 -- 0.508 -- -1.88 0.0622 -- 2.681 6659 -- --
77.95 0.414 3.36 -0.279 0.277 -- -0.862 -- -0.117 7.5 -- -- -- --
79.93 0.419 3.36 -0.298 0.276 -- -- -- -0.114 7.99 -- -- -- --
75.28 0.404 3.34 -0.0902 -- 0.696 -- -- -0.00239 -- 0.932 6784 -- --
74.82 0.403 3.33 -- 0.157 0.688 -- -- 0.0062 6.73 0.6594 6933 -- --
84.1 0.429 3.36 -0.295 -- -- -- -- -0.111 -- -- -- -- --
82.27 0.424 3.35 -- 0.274 -- -- -- -0.0811 8.07 -- -- -- --
75.45 0.405 3.33 -- -- 0.747 -- -- 0.0178 -- 0.83 6791 -- --
86.4 0.434 3.36 -- -- -- -- -- -0.078 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 68.91 temperature 25 270 < th dose dependent rect. 1 9
6 69.41 temperature 20 270 < th dose dependent rect. 3 6
13 69.93 temperature 30 720 < th dose dependent rect. 1 5
21 70.09 wind 3 14400 > th dose independent rect. 10 2
28 70.14 temperature 10 720 > th dose dependent rect. 22 11
29 70.19 humidity 90 270 < th dose dependent rect. 3 3
32 70.25 wind 3 14400 < th dose independent rect. 10 2
36 70.28 wind 5 14400 < th dose dependent rect. 11 1
43 70.37 temperature 25 270 < th dose dependent sin 5 NA
56 70.47 wind 5 14400 < th dose independent rect. 9 6
67 70.59 wind 5 14400 < th dose independent rect. 8 9
69 70.62 wind 5 14400 > th dose independent rect. 9 6
84 70.71 temperature 20 270 < th dose independent rect. 2 9
86 70.72 wind 5 14400 > th dose independent rect. 8 9
92 70.74 wind 1 14400 > th dose dependent rect. 10 2
112 70.81 temperature 25 720 < th dose dependent rect. 3 2
124 70.87 wind 3 14400 > th dose dependent rect. 8 7
149 70.94 temperature 10 720 > th dose dependent rect. 3 6
155 70.95 wind 5 14400 < th dose independent rect. 9 18
181 71.01 wind 5 14400 < th dose independent sin 23 NA
202 71.05 wind 5 14400 > th dose independent rect. 9 18
241 71.11 wind 5 14400 > th dose independent sin 23 NA
321 71.20 humidity 90 14400 > th dose dependent rect. 20 2
326 71.21 temperature 15 270 > th dose dependent sin 6 NA
386 71.29 humidity 90 270 < th dose independent rect. 3 1
392 71.30 wind 5 14400 < th dose independent rect. 24 19
437 71.35 temperature 20 10 < th dose independent rect. 4 8
463 71.38 wind 5 14400 > th dose independent rect. 24 19
471 71.38 wind 3 14400 > th dose dependent rect. 8 18
488 71.40 radiation 1 14400 > th dose independent rect. 13 4
491 71.40 atmosphere 1015 14400 > th dose independent rect. 8 10
492 71.40 atmosphere 1015 14400 > th dose independent rect. 7 12
494 71.40 atmosphere 1015 14400 < th dose independent rect. 7 13
500 71.40 atmosphere 1015 14400 > th dose dependent rect. 8 7
502 71.40 atmosphere 1015 14400 > th dose dependent rect. 7 10
503 71.40 atmosphere 1015 14400 > th dose dependent rect. 6 13
504 71.40 atmosphere 1015 14400 > th dose dependent rect. 5 15
506 71.41 atmosphere 1015 14400 > th dose independent rect. 11 2
507 71.41 atmosphere 1015 14400 > th dose independent rect. 10 4
508 71.41 radiation 1 14400 < th dose independent rect. 13 4
510 71.41 atmosphere 1015 14400 < th dose independent rect. 10 5
512 71.41 atmosphere 1015 14400 > th dose independent rect. 9 7
513 71.41 atmosphere 1015 14400 < th dose independent rect. 9 7
530 71.41 atmosphere 1015 14400 > th dose dependent sin 0 NA
531 71.41 radiation 1 4320 < th dose dependent rect. 6 1
532 71.41 atmosphere 1015 14400 > th dose dependent rect. 9 4
548 71.42 atmosphere 1015 14400 < th dose independent rect. 11 2
560 71.42 atmosphere 1015 14400 > th dose dependent rect. 1 1
561 71.42 atmosphere 1015 14400 > th dose dependent rect. 10 2
566 71.42 wind 3 14400 > th dose dependent rect. 8 14
627 71.45 atmosphere 1015 14400 > th dose independent sin 23 NA
663 71.46 atmosphere 1015 14400 < th dose independent sin 23 NA
673 71.46 atmosphere 1015 14400 > th dose dependent no NA NA
734 71.47 atmosphere 1015 14400 > th dose dependent rect. 11 21
788 71.48 atmosphere 1015 14400 > th dose dependent rect. 13 19
842 71.50 radiation 1 14400 > th dose independent rect. 9 8
851 71.50 temperature 30 720 < th dose dependent sin 9 NA
880 71.51 radiation 1 14400 < th dose independent rect. 9 8
947 71.53 wind 3 14400 < th dose independent rect. 21 1
958 71.53 atmosphere 1015 14400 > th dose dependent sin 13 NA
964 71.53 atmosphere 1015 14400 > th dose dependent rect. 17 13
1000 71.54 temperature 30 10 < th dose dependent rect. 2 10