Os08g0433500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os08g0433500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 513.77 | 1.06 | 8.18 | -1.85 | 3.14 | 1.05 | 2.38 | 5.69 | -0.382 | 7.01 | 70.16 | 4409 | 10.1 | 1.99 |
| 561.41 | 1.1 | 8.11 | -1.52 | 3.15 | 1.35 | 2.54 | -- | -0.366 | 7.09 | 70.03 | 4348 | 9.87 | 1.68 |
| 527.11 | 1.07 | 8.18 | -1.82 | 3.15 | 1.09 | -- | 6.01 | -0.383 | 6.87 | 70.52 | 4431 | 10.2 | 1.87 |
| 576.5 | 1.12 | 8.12 | -1.52 | 3.17 | 1.34 | -- | -- | -0.405 | 6.98 | 70.09 | 4348 | 9.9 | 1.65 |
| 1045.17 | 1.51 | 8.24 | -1.69 | -- | 1.06 | -- | 5.87 | -0.319 | -- | 70.08 | 4452 | 10.3 | 1.55 |
| 619.44 | 1.17 | 8.08 | -1.95 | 3.15 | -- | 2.61 | -- | -0.251 | 7.17 | -- | -- | -- | -- |
| 636.56 | 1.18 | 8.08 | -1.9 | 3.17 | -- | -- | -- | -0.259 | 7.02 | -- | -- | -- | -- |
| 1096.89 | 1.54 | 8.15 | -1.48 | -- | 1.67 | -- | -- | -0.275 | -- | 70 | 4447 | 9.88 | 1.58 |
| 634.83 | 1.17 | 8.12 | -- | 3.16 | 1.65 | -- | -- | -0.312 | 6.99 | 70.17 | 4327 | 9.9 | 1.63 |
| 1163.92 | 1.59 | 8.15 | -1.84 | -- | -- | -- | -- | -0.201 | -- | -- | -- | -- | -- |
| 732.04 | 1.27 | 8.04 | -- | 3.15 | -- | -- | -- | -0.0474 | 7.06 | -- | -- | -- | -- |
| 1099.72 | 1.54 | 8.19 | -- | -- | 1.41 | -- | -- | 0.157 | -- | 69.15 | 1522 | 9.65 | 1.37 |
| 1253.22 | 1.65 | 8.11 | -- | -- | -- | -- | -- | 0.00264 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 518.86 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 2 | 519.04 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 5 | 522.77 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 16 | 529.61 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 10 | 3 |
| 17 | 529.62 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 19 | 530.10 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 15 |
| 22 | 530.37 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 31 | 530.63 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 22 | 15 |
| 39 | 530.81 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 53 | 531.01 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 57 | 531.19 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 8 | 8 |
| 66 | 531.56 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 149 | 533.51 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 150 | 533.52 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 169 | 533.70 | humidity | 70.0 | 4320 | < th | dose independent | sin | 5 | NA |
| 214 | 534.17 | humidity | 70.0 | 4320 | > th | dose independent | sin | 5 | NA |
| 326 | 535.85 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 10 | 4 |
| 341 | 536.17 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 355 | 536.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 356 | 536.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 362 | 536.49 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 20 |
| 367 | 536.62 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 373 | 536.67 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 376 | 536.70 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 411 | 537.60 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 422 | 537.96 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 450 | 538.54 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 463 | 538.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 513 | 539.41 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 515 | 539.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 516 | 539.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 519 | 539.46 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 521 | 539.46 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 566 | 539.91 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 582 | 540.18 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 21 |
| 590 | 540.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 627 | 540.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 688 | 541.45 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 15 |
| 691 | 541.47 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 19 |
| 696 | 541.53 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 698 | 541.54 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 708 | 541.74 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 779 | 542.53 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 16 | NA |
| 813 | 542.76 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 826 | 542.89 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 8 |
| 846 | 543.03 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 847 | 543.03 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 853 | 543.09 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 20 |
| 897 | 543.36 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 900 | 543.39 | humidity | 60.0 | 4320 | > th | dose dependent | sin | 2 | NA |
| 926 | 543.54 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 17 |
| 938 | 543.66 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 7 |
| 962 | 543.82 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 972 | 543.86 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 2 | NA |