Os08g0432000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0432000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.3 | 0.459 | 6.94 | 0.788 | 1.1 | 1.01 | -0.621 | 0.819 | 0.687 | 4.22 | 27.88 | 63 | -- | -- |
| 96.7 | 0.458 | 6.93 | 0.767 | 1.13 | 0.998 | -0.185 | -- | 0.708 | 4.28 | 26.28 | 47 | -- | -- |
| 95.74 | 0.456 | 6.95 | 0.767 | 1.1 | 1.04 | -- | 0.697 | 0.659 | 4.27 | 28.28 | 45 | -- | -- |
| 96.7 | 0.458 | 6.94 | 0.771 | 1.12 | 1.02 | -- | -- | 0.694 | 4.41 | 25.47 | 45 | -- | -- |
| 110.18 | 0.489 | 6.95 | 0.833 | -- | 1.59 | -- | 0.371 | 0.724 | -- | 11.68 | 291 | -- | -- |
| 113.51 | 0.499 | 6.97 | 0.742 | 1.77 | -- | 0.442 | -- | 0.634 | 2.51 | -- | -- | -- | -- |
| 114.19 | 0.5 | 6.97 | 0.73 | 1.77 | -- | -- | -- | 0.632 | 2.54 | -- | -- | -- | -- |
| 110.59 | 0.49 | 6.95 | 0.786 | -- | 1.59 | -- | -- | 0.71 | -- | 11.69 | 299 | -- | -- |
| 112.38 | 0.494 | 6.96 | -- | 1.16 | 0.982 | -- | -- | 0.623 | 4.25 | 25.44 | 45 | -- | -- |
| 299.05 | 0.808 | 6.96 | 0.806 | -- | -- | -- | -- | 0.676 | -- | -- | -- | -- | -- |
| 128.25 | 0.53 | 6.99 | -- | 1.79 | -- | -- | -- | 0.55 | 2.55 | -- | -- | -- | -- |
| 125.79 | 0.522 | 6.97 | -- | -- | 1.57 | -- | -- | 0.608 | -- | 9.01 | 311 | -- | -- |
| 316.17 | 0.83 | 6.98 | -- | -- | -- | -- | -- | 0.587 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.36 | humidity | 70 | 30 | > th | dose dependent | sin | 0 | NA |
| 5 | 90.45 | temperature | 30 | 10 | < th | dose dependent | sin | 1 | NA |
| 13 | 91.21 | humidity | 70 | 30 | > th | dose dependent | rect. | 9 | 11 |
| 15 | 91.30 | humidity | 80 | 10 | < th | dose independent | rect. | 8 | 10 |
| 36 | 92.47 | humidity | 80 | 10 | < th | dose independent | rect. | 6 | 12 |
| 40 | 92.57 | temperature | 10 | 30 | > th | dose dependent | sin | 1 | NA |
| 44 | 92.71 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 11 |
| 49 | 92.85 | humidity | 80 | 10 | < th | dose independent | rect. | 4 | 14 |
| 57 | 93.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 12 |
| 58 | 93.09 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 62 | 93.15 | humidity | 80 | 10 | < th | dose independent | rect. | 2 | 16 |
| 74 | 93.47 | humidity | 80 | 10 | < th | dose independent | rect. | 24 | 18 |
| 92 | 93.67 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 96 | 93.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 10 |
| 115 | 93.98 | humidity | 80 | 10 | > th | dose independent | sin | 0 | NA |
| 116 | 93.98 | humidity | 90 | 10 | < th | dose dependent | rect. | 6 | 11 |
| 120 | 94.01 | humidity | 90 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 132 | 94.12 | humidity | 90 | 10 | < th | dose dependent | rect. | 23 | 19 |
| 161 | 94.35 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 10 |
| 234 | 94.91 | humidity | 90 | 10 | < th | dose dependent | rect. | 8 | 10 |
| 259 | 95.07 | humidity | 80 | 10 | < th | dose independent | sin | 0 | NA |
| 267 | 95.13 | humidity | 80 | 10 | > th | dose independent | rect. | 8 | 12 |
| 320 | 95.42 | humidity | 80 | 10 | < th | dose independent | rect. | 20 | 22 |
| 337 | 95.48 | radiation | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 353 | 95.58 | radiation | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 358 | 95.63 | humidity | 90 | 30 | < th | dose dependent | sin | 1 | NA |
| 368 | 95.67 | radiation | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 403 | 95.84 | humidity | 70 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 422 | 95.94 | radiation | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 459 | 96.11 | radiation | 30 | 90 | < th | dose dependent | no | NA | NA |
| 510 | 96.29 | temperature | 25 | 30 | > th | dose independent | rect. | 6 | 11 |
| 586 | 96.50 | temperature | 25 | 30 | < th | dose independent | sin | 1 | NA |
| 598 | 96.53 | radiation | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 669 | 96.73 | radiation | 10 | 90 | > th | dose independent | rect. | 17 | 23 |
| 701 | 96.83 | temperature | 25 | 30 | < th | dose independent | rect. | 3 | 13 |
| 748 | 96.94 | humidity | 60 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 773 | 97.07 | radiation | 10 | 90 | > th | dose independent | rect. | 6 | 10 |
| 823 | 97.19 | humidity | 80 | 10 | > th | dose independent | rect. | 3 | 17 |
| 859 | 97.25 | humidity | 60 | 10 | > th | dose dependent | no | NA | NA |
| 877 | 97.29 | humidity | 60 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 913 | 97.38 | humidity | 60 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 920 | 97.40 | radiation | 10 | 90 | > th | dose independent | sin | 0 | NA |
| 927 | 97.40 | humidity | 60 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 943 | 97.46 | humidity | 70 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 970 | 97.51 | humidity | 60 | 10 | > th | dose dependent | rect. | 17 | 23 |