Os08g0431700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0431700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 248.89 | 0.741 | 5.35 | -1.11 | 0.524 | -0.91 | 0.516 | 0.277 | -0.427 | 13.8 | 30.1 | 10 | -- | -- |
| 248.85 | 0.74 | 5.35 | -1.06 | 0.518 | -0.915 | 0.429 | -- | -0.415 | 13.8 | 30.1 | 10 | -- | -- |
| 249.49 | 0.741 | 5.34 | -1.01 | 0.51 | -0.933 | -- | -0.213 | -0.407 | 13.7 | 30.1 | 10 | -- | -- |
| 249.56 | 0.741 | 5.34 | -1.05 | 0.512 | -0.932 | -- | -- | -0.416 | 13.7 | 30.1 | 10 | -- | -- |
| 260.06 | 0.755 | 5.37 | -1.13 | -- | -1.44 | -- | -0.343 | -0.506 | -- | 30.1 | 10 | -- | -- |
| 260.12 | 0.756 | 5.3 | -0.847 | 0.827 | -- | 0.552 | -- | -0.239 | 13.9 | -- | -- | -- | -- |
| 261.28 | 0.757 | 5.3 | -0.83 | 0.826 | -- | -- | -- | -0.236 | 13.9 | -- | -- | -- | -- |
| 260.22 | 0.755 | 5.37 | -1.18 | -- | -1.44 | -- | -- | -0.522 | -- | 30.1 | 10 | -- | -- |
| 275.75 | 0.778 | 5.3 | -- | 0.676 | -0.497 | -- | -- | -0.227 | 13.8 | 30.1 | 10 | -- | -- |
| 302.6 | 0.813 | 5.31 | -0.864 | -- | -- | -- | -- | -0.255 | -- | -- | -- | -- | -- |
| 279.44 | 0.782 | 5.28 | -- | 0.842 | -- | -- | -- | -0.144 | 13.9 | -- | -- | -- | -- |
| 294.93 | 0.8 | 5.33 | -- | -- | -1.15 | -- | -- | -0.33 | -- | 30.86 | 2 | -- | -- |
| 322.29 | 0.838 | 5.29 | -- | -- | -- | -- | -- | -0.159 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 235.22 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 8 |
| 3 | 236.19 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 19 |
| 4 | 236.25 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 16 |
| 5 | 236.34 | temperature | 30.0 | 30 | < th | dose dependent | sin | 5 | NA |
| 7 | 236.40 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 12 |
| 8 | 236.41 | temperature | 15.0 | 10 | > th | dose dependent | sin | 5 | NA |
| 12 | 236.47 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 24 | 236.94 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 31 | 237.22 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 15 |
| 32 | 237.24 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 9 |
| 82 | 239.22 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 18 |
| 95 | 239.52 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 10 |
| 98 | 239.57 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 22 | 8 |
| 105 | 239.74 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 15 |
| 169 | 240.66 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 23 | 9 |
| 182 | 240.75 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 16 |
| 193 | 240.89 | temperature | 25.0 | 270 | > th | dose independent | rect. | 3 | 7 |
| 207 | 241.08 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 9 |
| 217 | 241.24 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 7 |
| 245 | 241.50 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 23 |
| 305 | 242.14 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 20 | 15 |
| 327 | 242.29 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 14 |
| 337 | 242.36 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 352 | 242.45 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 18 | 16 |
| 378 | 242.63 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 21 | 14 |
| 386 | 242.69 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 20 |
| 400 | 242.81 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 15 |
| 443 | 243.13 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 11 | 21 |
| 452 | 243.20 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 18 | 16 |
| 455 | 243.22 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 12 |
| 472 | 243.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 17 |
| 494 | 243.47 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 24 | 8 |
| 505 | 243.52 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 12 |
| 518 | 243.59 | humidity | 80.0 | 90 | < th | dose independent | rect. | 8 | 3 |
| 530 | 243.67 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 22 | 14 |
| 554 | 243.77 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 20 |
| 575 | 243.87 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 4 |
| 589 | 243.93 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 13 |
| 601 | 243.99 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 7 |
| 617 | 244.05 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 24 | 8 |
| 649 | 244.19 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 11 | 21 |
| 650 | 244.20 | wind | 1.0 | 270 | > th | dose independent | rect. | 22 | 8 |
| 657 | 244.23 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 13 |
| 658 | 244.23 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 11 | 21 |
| 663 | 244.25 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 17 |
| 664 | 244.25 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 723 | 244.43 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 2 | 6 |
| 729 | 244.45 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 749 | 244.49 | wind | 9.0 | 270 | < th | dose dependent | rect. | 18 | 16 |
| 773 | 244.59 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 16 |
| 845 | 244.83 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 2 | 6 |
| 877 | 244.95 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 19 | 8 |
| 880 | 244.96 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 16 |
| 916 | 245.05 | wind | 5.0 | 90 | < th | dose independent | rect. | 8 | 3 |
| 919 | 245.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 16 |
| 921 | 245.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 16 |
| 925 | 245.08 | radiation | 10.0 | 90 | > th | dose independent | rect. | 8 | 3 |
| 929 | 245.09 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 948 | 245.18 | temperature | 25.0 | 90 | > th | dose independent | sin | 4 | NA |
| 983 | 245.29 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 16 |
| 987 | 245.29 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 16 |
| 989 | 245.29 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 21 |