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Os08g0430800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.27 (0.0198) R2 : 0.0194
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.125 (0.0417) R2dN8 : 0.025 R2N8 : 0.0194
σ : 0.373
deviance : 63.85
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
36.54 0.284 8.24 0.206 0.531 -0.0583 1.02 -2.48 -0.048 19.5 0.3782 1348 -- --
39.86 0.294 8.27 0.0455 0.484 0.474 1.02 -- -0.0577 20 0.06357 1429 -- --
36.78 0.282 8.24 0.248 0.564 0.112 -- -2.87 -0.0216 19.4 0.2919 1198 -- --
45.21 0.313 8.27 0.0233 0.482 0.534 -- -- -0.0529 19 0.17 1494 -- --
43.5 0.307 8.3 0.0716 -- -0.596 -- -3.06 -0.224 -- 0.39 967 -- --
41.43 0.302 8.29 -0.116 0.534 -- 1.46 -- -0.138 19.9 -- -- -- --
47.32 0.322 8.29 -0.153 0.545 -- -- -- -0.134 19.4 -- -- -- --
50.23 0.33 8.28 -0.173 -- -0.662 -- -- -0.16 -- 6.006 870 -- --
45.09 0.313 8.27 -- 0.497 0.562 -- -- -0.0576 18.5 0.1833 1545 -- --
63.16 0.371 8.28 -0.162 -- -- -- -- -0.143 -- -- -- -- --
47.94 0.324 8.29 -- 0.547 -- -- -- -0.117 19.4 -- -- -- --
51.03 0.333 8.28 -- -- -0.663 -- -- -0.168 -- 10 854 -- --
63.85 0.373 8.27 -- -- -- -- -- -0.125 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.69 humidity 90.0 30 < th dose independent rect. 20 17
8 33.48 humidity 90.0 30 < th dose independent sin 7 NA
10 33.59 radiation 20.0 270 < th dose independent rect. 15 8
11 33.62 temperature 15.0 270 > th dose independent rect. 16 7
20 33.85 humidity 90.0 30 < th dose independent rect. 17 20
21 33.89 humidity 50.0 270 > th dose independent rect. 23 17
26 34.00 radiation 40.0 270 < th dose dependent rect. 14 9
39 34.23 humidity 50.0 270 > th dose independent rect. 24 15
42 34.26 atmosphere 1015.0 270 < th dose independent rect. 23 17
54 34.45 atmosphere 995.0 270 > th dose independent rect. 16 7
61 34.53 humidity 50.0 10 > th dose dependent rect. 24 17
67 34.55 temperature 10.0 270 > th dose independent rect. 23 17
70 34.59 radiation 30.0 4320 < th dose independent rect. 1 6
71 34.59 wind 9.0 270 < th dose independent rect. 23 17
77 34.66 atmosphere 995.0 270 > th dose independent rect. 23 17
89 34.71 temperature 15.0 270 > th dose independent rect. 3 9
90 34.72 wind 7.0 270 < th dose independent rect. 12 15
99 34.83 humidity 50.0 270 > th dose independent rect. 16 7
106 34.87 precipitation 0.1 270 < th dose independent rect. 16 7
107 34.87 precipitation 0.1 270 < th dose dependent rect. 16 7
117 34.90 wind 1.0 270 > th dose independent rect. 16 7
123 34.93 wind 9.0 270 < th dose independent rect. 16 7
124 34.93 temperature 15.0 90 > th dose independent rect. 19 17
126 34.94 humidity 80.0 10 > th dose dependent rect. 24 17
146 35.04 atmosphere 1015.0 1440 < th dose independent rect. 2 5
149 35.04 temperature 15.0 270 > th dose independent rect. 17 18
156 35.06 precipitation 0.1 270 < th dose independent rect. 23 17
159 35.06 precipitation 0.1 270 < th dose dependent rect. 23 17
160 35.07 precipitation 0.1 270 < th dose independent rect. 3 8
162 35.07 precipitation 0.1 270 < th dose dependent rect. 3 8
167 35.10 temperature 15.0 270 > th dose independent rect. 16 20
174 35.13 temperature 30.0 270 < th dose independent rect. 16 7
177 35.14 temperature 15.0 90 > th dose independent rect. 19 5
203 35.20 precipitation 0.1 1440 < th dose independent rect. 21 6
206 35.20 precipitation 0.1 1440 < th dose dependent rect. 21 6
227 35.26 radiation 1.0 90 > th dose independent sin 5 NA
245 35.32 wind 7.0 270 < th dose independent rect. 3 8
253 35.34 temperature 15.0 270 > th dose independent rect. 19 2
289 35.43 radiation 1.0 90 > th dose independent rect. 5 8
304 35.44 humidity 90.0 10 < th dose dependent rect. 20 11
316 35.48 atmosphere 995.0 270 > th dose independent rect. 3 8
317 35.48 atmosphere 1015.0 270 < th dose independent rect. 3 8
319 35.48 temperature 10.0 270 > th dose independent rect. 11 16
321 35.49 temperature 15.0 90 > th dose independent rect. 5 8
327 35.52 temperature 10.0 43200 > th dose independent rect. 13 7
329 35.53 temperature 15.0 10 > th dose independent rect. 17 9
349 35.57 temperature 15.0 10 > th dose dependent rect. 20 17
355 35.58 temperature 10.0 270 > th dose dependent rect. 11 16
361 35.59 temperature 20.0 270 > th dose independent rect. 11 16
389 35.67 wind 1.0 270 > th dose independent rect. 10 7
401 35.69 atmosphere 1000.0 270 > th dose independent rect. 17 17
412 35.71 temperature 10.0 90 > th dose dependent rect. 19 17
415 35.72 temperature 15.0 270 > th dose independent rect. 2 23
416 35.72 radiation 1.0 90 < th dose dependent sin 4 NA
430 35.74 humidity 90.0 270 < th dose independent rect. 17 6
439 35.76 atmosphere 1000.0 90 > th dose independent rect. 19 5
467 35.80 wind 9.0 90 < th dose independent rect. 5 8
468 35.80 precipitation 0.1 90 < th dose independent rect. 5 8
472 35.80 atmosphere 1000.0 90 > th dose independent rect. 19 17
474 35.80 precipitation 0.1 90 < th dose dependent rect. 5 8
480 35.81 wind 1.0 270 > th dose independent rect. 24 16
482 35.82 radiation 1.0 90 < th dose independent rect. 1 15
485 35.82 temperature 30.0 270 < th dose independent rect. 17 17
489 35.82 humidity 50.0 10 > th dose dependent rect. 24 19
491 35.83 atmosphere 1000.0 270 > th dose independent rect. 19 2
502 35.84 humidity 50.0 14400 > th dose independent rect. 18 7
504 35.84 wind 9.0 270 < th dose independent rect. 21 22
517 35.86 temperature 30.0 10 < th dose dependent rect. 2 15
527 35.88 atmosphere 995.0 90 > th dose independent rect. 5 8
528 35.88 atmosphere 1015.0 90 < th dose independent rect. 5 8
531 35.88 precipitation 0.1 270 < th dose independent rect. 11 16
535 35.88 humidity 90.0 270 < th dose dependent rect. 19 3
536 35.88 precipitation 0.1 270 < th dose dependent rect. 11 16
541 35.90 wind 9.0 270 < th dose independent rect. 10 7
547 35.90 atmosphere 995.0 90 > th dose dependent rect. 19 16
552 35.92 radiation 1.0 90 < th dose independent sin 4 NA
565 35.93 humidity 90.0 10 < th dose dependent sin 8 NA
581 35.96 precipitation 0.1 270 < th dose independent rect. 17 17
584 35.96 precipitation 0.1 270 < th dose dependent rect. 17 17
591 35.98 humidity 90.0 270 < th dose independent rect. 19 3
592 35.98 temperature 25.0 10 > th dose independent rect. 5 7
595 35.98 radiation 1.0 90 < th dose dependent rect. 1 15
621 36.02 atmosphere 1015.0 270 < th dose independent rect. 11 16
627 36.03 temperature 10.0 270 > th dose independent rect. 10 7
628 36.03 atmosphere 1015.0 270 < th dose independent rect. 10 7
633 36.03 humidity 90.0 30 > th dose independent rect. 24 16
641 36.04 humidity 90.0 30 > th dose independent rect. 24 14
642 36.04 humidity 50.0 10 > th dose independent rect. 2 15
671 36.07 precipitation 0.1 270 < th dose independent rect. 10 7
672 36.07 humidity 50.0 270 > th dose independent rect. 3 8
673 36.07 humidity 50.0 270 > th dose independent rect. 17 17
674 36.07 temperature 15.0 90 > th dose independent rect. 5 20
675 36.07 precipitation 0.1 270 < th dose dependent rect. 10 7
676 36.07 radiation 20.0 10 < th dose dependent rect. 17 9
679 36.07 humidity 90.0 270 < th dose dependent rect. 19 14
684 36.08 temperature 15.0 270 > th dose independent rect. 3 21
687 36.09 humidity 90.0 90 < th dose independent rect. 19 5
692 36.09 humidity 90.0 30 < th dose independent rect. 17 14
720 36.12 wind 1.0 270 > th dose dependent rect. 17 7
734 36.14 temperature 30.0 270 < th dose independent rect. 19 2
735 36.14 humidity 50.0 270 > th dose independent rect. 19 2
737 36.14 radiation 1.0 270 < th dose independent rect. 19 2
752 36.14 temperature 10.0 270 > th dose independent rect. 21 22
753 36.14 radiation 1.0 270 < th dose dependent rect. 19 2
767 36.15 wind 9.0 270 < th dose independent rect. 17 17
773 36.16 wind 9.0 270 < th dose independent rect. 19 2
776 36.16 temperature 30.0 90 < th dose independent rect. 19 5
777 36.16 humidity 50.0 90 > th dose independent rect. 19 5
780 36.16 radiation 1.0 90 < th dose independent rect. 19 5
790 36.16 radiation 1.0 90 < th dose dependent rect. 19 5
799 36.17 temperature 30.0 270 < th dose independent rect. 3 8
801 36.17 radiation 10.0 10 < th dose independent rect. 17 9
807 36.17 radiation 1.0 270 < th dose dependent rect. 22 18
808 36.18 wind 1.0 270 > th dose independent rect. 19 2
827 36.19 wind 9.0 90 < th dose independent rect. 19 5
828 36.19 humidity 50.0 270 > th dose independent rect. 11 5
836 36.19 atmosphere 1015.0 270 < th dose independent rect. 21 22
846 36.20 atmosphere 995.0 270 > th dose dependent rect. 17 5
862 36.22 wind 1.0 90 > th dose independent rect. 19 5
876 36.23 atmosphere 1015.0 270 < th dose independent rect. 16 7
880 36.23 wind 7.0 90 < th dose independent rect. 19 17
882 36.23 atmosphere 995.0 270 > th dose dependent rect. 16 7
931 36.25 humidity 50.0 270 > th dose independent rect. 10 7
943 36.26 precipitation 0.1 270 < th dose independent rect. 19 2
949 36.26 radiation 1.0 90 < th dose independent rect. 1 10
955 36.26 precipitation 0.1 270 < th dose dependent rect. 19 2
957 36.26 temperature 10.0 270 > th dose dependent rect. 21 8
972 36.27 temperature 15.0 10 > th dose dependent sin 6 NA
984 36.28 precipitation 0.1 90 < th dose independent rect. 19 5
992 36.28 precipitation 0.1 90 < th dose dependent rect. 19 5