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Os08g0427300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0106) R2 : 0.17
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.216 (0.0224) R2dN8 : 0.219 R2N8 : 0.17
σ : 0.2
deviance : 18.39
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
10.35 0.151 11.7 0.35 0.183 0.356 -0.0905 0.157 0.291 2.79 70.55 1473 -- --
10.26 0.149 11.7 0.337 0.142 0.386 -0.134 -- 0.298 0.669 71.63 1897 -- --
10.38 0.15 11.7 0.353 0.185 0.355 -- 0.151 0.292 2.84 70.26 1468 -- --
10.26 0.149 11.7 0.353 0.196 0.392 -- -- 0.309 0.717 71.43 2139 -- --
11.38 0.157 11.7 0.381 -- 0.421 -- -0.065 0.312 -- 69.69 1742 -- --
12.37 0.165 11.7 0.375 0.187 -- -0.123 -- 0.254 2.68 -- -- -- --
12.42 0.165 11.7 0.378 0.187 -- -- -- 0.254 2.76 -- -- -- --
11.37 0.157 11.7 0.361 -- 0.448 -- -- 0.308 -- 72.1 1738 -- --
13.49 0.171 11.7 -- 0.229 0.415 -- -- 0.271 1.33 71.93 2323 -- --
14.46 0.178 11.7 0.386 -- -- -- -- 0.259 -- -- -- -- --
16.19 0.188 11.7 -- 0.195 -- -- -- 0.212 2.78 -- -- -- --
14.75 0.179 11.7 -- -- 0.467 -- -- 0.266 -- 72.43 1749 -- --
18.39 0.2 11.7 -- -- -- -- -- 0.216 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 9.34 humidity 80.0 14400 > th dose independent rect. 13 2
5 9.37 precipitation 0.1 14400 > th dose dependent rect. 13 1
6 9.41 humidity 80.0 1440 < th dose independent rect. 11 1
8 9.44 humidity 80.0 14400 < th dose independent rect. 14 1
11 9.50 humidity 80.0 1440 > th dose independent rect. 11 1
12 9.52 humidity 80.0 14400 > th dose independent rect. 10 1
16 9.53 humidity 80.0 14400 > th dose independent rect. 10 6
24 9.57 precipitation 0.1 14400 < th dose independent rect. 13 1
28 9.57 precipitation 0.1 14400 < th dose dependent rect. 13 1
32 9.58 wind 3.0 43200 < th dose dependent rect. 23 6
35 9.59 precipitation 0.1 43200 > th dose dependent rect. 19 1
37 9.60 wind 3.0 43200 < th dose dependent rect. 23 8
40 9.61 humidity 80.0 14400 < th dose independent rect. 10 6
43 9.62 precipitation 0.1 14400 > th dose independent rect. 19 1
47 9.62 wind 3.0 43200 < th dose dependent rect. 21 9
50 9.64 precipitation 0.1 14400 > th dose independent rect. 13 1
53 9.65 precipitation 0.1 14400 < th dose independent rect. 19 1
64 9.65 precipitation 0.1 14400 < th dose dependent rect. 19 1
73 9.66 humidity 70.0 14400 > th dose dependent rect. 13 2
76 9.67 precipitation 0.1 14400 < th dose independent rect. 16 1
80 9.67 precipitation 0.1 14400 < th dose dependent rect. 16 1
82 9.68 precipitation 0.1 14400 > th dose independent rect. 16 1
89 9.69 precipitation 0.1 14400 > th dose dependent rect. 16 1
91 9.70 humidity 80.0 14400 < th dose independent rect. 10 1
102 9.72 wind 1.0 4320 > th dose independent rect. 17 2
106 9.72 wind 3.0 43200 < th dose dependent rect. 23 14
109 9.73 wind 3.0 43200 < th dose dependent sin 9 NA
146 9.78 precipitation 0.1 4320 > th dose dependent rect. 3 14
153 9.79 precipitation 0.1 14400 > th dose dependent rect. 13 4
161 9.80 wind 1.0 43200 < th dose independent rect. 5 1
162 9.80 humidity 90.0 14400 > th dose independent rect. 20 1
178 9.81 precipitation 0.1 14400 > th dose dependent rect. 11 6
180 9.81 precipitation 0.1 4320 > th dose dependent rect. 18 23
223 9.86 wind 3.0 43200 < th dose dependent rect. 1 2
229 9.87 humidity 80.0 43200 > th dose independent rect. 4 3
230 9.87 precipitation 0.1 14400 < th dose independent rect. 13 4
237 9.87 precipitation 0.1 14400 < th dose dependent rect. 13 4
247 9.88 precipitation 0.1 14400 > th dose independent rect. 13 4
256 9.89 precipitation 0.1 4320 > th dose independent rect. 3 14
257 9.89 precipitation 0.1 4320 < th dose independent rect. 3 14
264 9.89 precipitation 0.1 4320 < th dose dependent rect. 3 14
271 9.90 precipitation 0.1 4320 > th dose dependent rect. 3 11
273 9.90 precipitation 0.1 4320 > th dose dependent rect. 18 20
278 9.91 precipitation 0.1 14400 < th dose independent rect. 16 4
282 9.91 precipitation 0.1 14400 < th dose dependent rect. 16 4
287 9.91 precipitation 0.1 4320 > th dose dependent rect. 18 15
291 9.92 precipitation 0.1 14400 > th dose independent rect. 16 4
296 9.92 precipitation 0.1 4320 > th dose dependent rect. 18 12
303 9.93 precipitation 0.1 14400 > th dose independent rect. 11 6
304 9.93 precipitation 0.1 14400 < th dose independent rect. 11 6
307 9.93 precipitation 0.1 14400 < th dose dependent rect. 11 6
324 9.94 wind 3.0 43200 < th dose dependent rect. 4 9
325 9.94 humidity 80.0 14400 > th dose dependent rect. 9 10
333 9.95 wind 3.0 43200 > th dose independent rect. 5 2
335 9.95 humidity 90.0 14400 > th dose independent rect. 19 5
371 9.96 humidity 90.0 1440 > th dose dependent rect. 6 14
383 9.97 precipitation 0.1 14400 > th dose independent rect. 13 7
384 9.97 precipitation 0.1 14400 < th dose independent rect. 13 7
389 9.97 wind 1.0 43200 < th dose dependent rect. 5 1
398 9.97 precipitation 0.1 14400 < th dose dependent rect. 13 7
409 9.98 humidity 90.0 14400 > th dose independent rect. 7 1
414 9.98 precipitation 0.1 1440 > th dose independent rect. 5 4
416 9.98 precipitation 0.1 1440 > th dose independent rect. 5 6
420 9.98 precipitation 0.1 14400 > th dose independent rect. 11 9
421 9.98 precipitation 0.1 14400 < th dose independent rect. 11 9
423 9.98 humidity 90.0 4320 > th dose dependent rect. 7 1
430 9.98 precipitation 0.1 1440 > th dose dependent rect. 5 8
432 9.98 precipitation 0.1 14400 < th dose dependent rect. 11 9
443 9.99 precipitation 0.1 1440 > th dose dependent rect. 5 4
445 9.99 precipitation 0.1 1440 > th dose dependent rect. 5 6
463 10.00 humidity 80.0 1440 > th dose dependent rect. 10 2
476 10.01 humidity 80.0 14400 > th dose independent sin 22 NA
486 10.01 humidity 80.0 14400 > th dose dependent rect. 9 2
524 10.02 humidity 90.0 1440 > th dose dependent rect. 7 8
540 10.03 wind 1.0 4320 < th dose independent rect. 18 1
548 10.03 wind 3.0 43200 < th dose independent rect. 24 7
555 10.03 wind 9.0 14400 > th dose dependent rect. 10 1
560 10.03 wind 1.0 43200 > th dose dependent rect. 5 2
570 10.03 precipitation 0.1 4320 > th dose dependent rect. 7 10
587 10.04 wind 1.0 43200 > th dose independent rect. 1 1
595 10.04 precipitation 0.1 4320 < th dose independent rect. 4 3
604 10.04 wind 3.0 43200 < th dose independent rect. 24 16
606 10.04 precipitation 0.1 4320 < th dose dependent rect. 4 3
645 10.06 wind 3.0 43200 > th dose independent rect. 12 1
646 10.06 wind 3.0 43200 < th dose independent rect. 12 1
649 10.06 humidity 80.0 43200 < th dose independent rect. 3 4
657 10.06 precipitation 0.1 4320 > th dose independent rect. 3 11
668 10.06 precipitation 0.1 14400 > th dose dependent rect. 16 4
685 10.07 humidity 80.0 43200 < th dose independent rect. 23 8
690 10.07 precipitation 0.1 4320 < th dose independent rect. 3 11
692 10.07 wind 3.0 43200 < th dose independent rect. 18 14
705 10.07 precipitation 0.1 4320 < th dose dependent rect. 3 11
736 10.08 humidity 80.0 14400 > th dose dependent sin 22 NA
737 10.08 humidity 90.0 720 > th dose dependent sin 23 NA
752 10.09 wind 3.0 43200 < th dose independent sin 4 NA
754 10.09 wind 9.0 14400 < th dose independent rect. 10 1
775 10.09 wind 9.0 43200 < th dose dependent rect. 6 1
776 10.09 humidity 90.0 14400 > th dose dependent rect. 20 1
777 10.09 wind 3.0 43200 < th dose dependent rect. 11 2
798 10.10 humidity 80.0 43200 < th dose independent rect. 3 1
809 10.10 precipitation 0.1 1440 < th dose independent rect. 5 7
812 10.10 radiation 1.0 14400 < th dose independent rect. 18 11
823 10.10 precipitation 0.1 4320 > th dose independent rect. 18 23
824 10.10 precipitation 0.1 4320 < th dose independent rect. 18 23
833 10.10 radiation 1.0 4320 < th dose dependent rect. 7 3
835 10.10 humidity 90.0 1440 > th dose dependent rect. 6 5
842 10.10 precipitation 0.1 1440 < th dose dependent rect. 5 7
859 10.10 precipitation 0.1 4320 < th dose dependent rect. 18 23
864 10.11 humidity 80.0 43200 < th dose independent rect. 23 1
894 10.11 wind 3.0 43200 > th dose independent rect. 1 15
900 10.11 wind 5.0 43200 < th dose dependent rect. 6 1
904 10.11 radiation 1.0 14400 < th dose dependent rect. 7 1
909 10.11 wind 3.0 14400 < th dose dependent rect. 21 4
924 10.12 humidity 90.0 14400 > th dose independent sin 16 NA
925 10.12 humidity 80.0 14400 < th dose independent sin 22 NA
926 10.12 humidity 90.0 14400 < th dose independent rect. 20 1
927 10.12 atmosphere 1005.0 14400 > th dose independent rect. 16 1
928 10.12 atmosphere 1005.0 14400 < th dose independent rect. 16 1
934 10.12 wind 3.0 43200 > th dose independent rect. 1 6