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Os08g0425200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0237) R2 : 0.957
β1 : -0.876 (0.0861) R2dD : 0.0101 R2D : 0.00898
β2 : 4.1 (0.0832) R2dC : 0.429 R2C : 0.78
β3 : -2.87 (0.0985) R2dE : 0.154 R2E : 0.509
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.317 (0.051) R2dN8 : 0.00493 R2N8 : 0.0102
σ : 0.439
deviance : 88.68
__
_____
C
peak time of C : 17.1
E
wheather : temperature
threshold : 15.39
memory length : 316
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.83
open length of G : 2.85

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.49 0.444 12.4 -0.942 4.11 -2.9 -0.00465 -0.659 -0.34 17.1 14.75 297 2.92 2.93
89.18 0.44 12.4 -0.861 4.12 -2.88 -0.00155 -- -0.324 17.1 15.41 304 2.87 2.95
88.99 0.439 12.4 -0.894 4.11 -2.9 -- -0.393 -0.351 17.1 14.97 304 2.85 2.95
88.68 0.439 12.4 -0.876 4.1 -2.87 -- -- -0.317 17.1 15.39 316 2.83 2.85
347.24 0.868 12.4 -0.766 -- -4.97 -- 0.509 -0.19 -- -0.8756 476 0.317 3.32
235.46 0.719 12.5 -1.05 5.8 -- 0.508 -- -0.604 17.4 -- -- -- --
236.1 0.72 12.5 -1.05 5.8 -- -- -- -0.601 17.4 -- -- -- --
290.36 0.794 12.3 -0.733 -- -5.91 -- -- -0.0562 -- 5.086 419 0.0116 5.49
107.55 0.483 12.3 -- 4.01 -3.01 -- -- -0.169 17 15.94 335 2.67 3.02
1986.39 2.08 12.4 -1.24 -- -- -- -- -0.744 -- -- -- -- --
264.98 0.761 12.4 -- 5.82 -- -- -- -0.485 17.4 -- -- -- --
303.6 0.812 12.2 -- -- -5.96 -- -- 0.0264 -- 5.172 432 0.00486 5.34
2027 2.1 12.4 -- -- -- -- -- -0.606 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 93.06 temperature 15.0 270 > th dose dependent rect. 3 3
2 94.22 temperature 15.0 270 > th dose dependent rect. 2 5
3 97.19 temperature 20.0 270 > th dose independent rect. 2 5
4 97.56 temperature 20.0 270 > th dose independent rect. 3 3
26 110.70 humidity 70.0 270 > th dose dependent rect. 3 3
36 112.41 humidity 70.0 270 > th dose dependent rect. 2 5
46 114.76 humidity 80.0 270 > th dose independent rect. 2 5
48 114.80 wind 5.0 90 < th dose dependent rect. 4 5
51 115.31 wind 7.0 270 < th dose dependent rect. 3 3
54 115.70 humidity 80.0 270 > th dose independent rect. 3 3
81 119.02 radiation 10.0 270 < th dose independent rect. 3 3
85 119.54 precipitation 0.1 270 < th dose independent rect. 3 3
86 119.54 precipitation 0.1 270 < th dose dependent rect. 3 3
91 120.06 wind 3.0 30 < th dose independent rect. 4 5
98 120.50 precipitation 0.1 270 < th dose independent rect. 6 21
99 120.50 precipitation 0.1 270 < th dose dependent rect. 6 21
106 121.25 atmosphere 1010.0 270 < th dose independent rect. 3 3
111 121.69 wind 7.0 270 < th dose independent rect. 3 3
114 121.70 temperature 10.0 270 > th dose independent rect. 3 3
116 121.70 temperature 30.0 270 < th dose independent rect. 3 3
117 121.70 humidity 50.0 270 > th dose independent rect. 3 3
120 121.70 atmosphere 995.0 270 > th dose independent rect. 3 3
125 121.70 temperature 10.0 270 > th dose independent rect. 6 21
126 121.73 precipitation 0.1 270 < th dose independent rect. 2 5
127 121.73 precipitation 0.1 270 < th dose dependent rect. 2 5
130 121.94 precipitation 0.1 270 < th dose independent rect. 7 19
131 121.94 precipitation 0.1 270 < th dose dependent rect. 7 19
135 122.05 radiation 40.0 270 < th dose dependent rect. 3 3
143 122.56 radiation 20.0 270 < th dose independent rect. 2 5
147 122.69 wind 9.0 270 < th dose independent rect. 6 21
152 123.15 wind 3.0 270 < th dose independent rect. 3 3
155 123.44 wind 9.0 270 < th dose independent rect. 2 5
156 123.44 temperature 10.0 270 > th dose independent rect. 2 5
158 123.44 temperature 30.0 270 < th dose independent rect. 2 5
159 123.44 humidity 50.0 270 > th dose independent rect. 2 5
161 123.44 atmosphere 995.0 270 > th dose independent rect. 2 5
162 123.44 atmosphere 1015.0 270 < th dose independent rect. 2 5
164 123.44 temperature 10.0 270 > th dose independent rect. 7 19
166 123.59 wind 3.0 270 < th dose independent rect. 2 5
171 123.91 radiation 40.0 270 < th dose dependent rect. 2 5
172 124.04 wind 9.0 270 < th dose independent rect. 7 19
176 124.26 humidity 50.0 30 > th dose dependent rect. 4 5
183 124.54 wind 9.0 270 < th dose dependent rect. 4 1
191 124.90 temperature 20.0 270 > th dose independent rect. 14 17
193 125.03 temperature 20.0 270 > th dose independent rect. 2 19
202 125.35 radiation 40.0 30 < th dose independent rect. 4 5
213 125.79 humidity 70.0 30 > th dose independent rect. 4 5
216 126.07 precipitation 0.1 30 < th dose independent rect. 4 5
217 126.07 precipitation 0.1 30 < th dose dependent rect. 4 5
219 126.16 wind 9.0 30 < th dose independent rect. 4 5
220 126.16 temperature 10.0 30 > th dose independent rect. 4 5
222 126.16 temperature 30.0 30 < th dose independent rect. 4 5
223 126.16 humidity 50.0 30 > th dose independent rect. 4 5
225 126.16 atmosphere 995.0 30 > th dose independent rect. 4 5
226 126.16 atmosphere 1015.0 30 < th dose independent rect. 4 5
227 126.16 temperature 10.0 30 > th dose independent rect. 9 19
233 126.51 wind 9.0 30 < th dose independent rect. 9 19
235 126.59 precipitation 0.1 30 < th dose independent rect. 9 19
236 126.59 precipitation 0.1 30 < th dose dependent rect. 9 19
298 128.41 radiation 1.0 270 < th dose independent rect. 4 1
311 128.55 radiation 10.0 270 < th dose dependent rect. 4 1
320 128.70 radiation 40.0 90 < th dose dependent rect. 4 5
325 128.78 wind 9.0 270 < th dose independent rect. 4 1
326 128.78 temperature 10.0 270 > th dose independent rect. 4 1
328 128.78 temperature 30.0 270 < th dose independent rect. 4 1
329 128.78 humidity 50.0 270 > th dose independent rect. 4 1
332 128.78 atmosphere 995.0 270 > th dose independent rect. 4 1
333 128.78 atmosphere 1010.0 270 < th dose independent rect. 4 1
338 128.78 temperature 10.0 270 > th dose independent rect. 5 23
381 129.53 atmosphere 1015.0 270 < th dose dependent rect. 3 3
383 129.58 atmosphere 1015.0 30 < th dose dependent rect. 4 5
452 131.52 precipitation 0.1 270 < th dose independent rect. 20 6
454 131.52 precipitation 0.1 270 < th dose dependent rect. 20 6
506 132.12 wind 9.0 270 < th dose independent rect. 20 6
511 132.22 temperature 10.0 270 > th dose independent rect. 20 6
512 132.22 temperature 30.0 270 < th dose independent rect. 20 6
513 132.22 humidity 50.0 270 > th dose independent rect. 20 6
516 132.22 atmosphere 995.0 270 > th dose independent rect. 20 6
517 132.22 radiation 1.0 270 < th dose independent rect. 20 6
522 132.22 temperature 10.0 270 > th dose independent rect. 2 18
523 132.22 atmosphere 1015.0 270 < th dose independent rect. 2 18
524 132.22 radiation 1.0 270 < th dose dependent rect. 20 6
538 132.43 wind 7.0 30 < th dose independent rect. 23 5
552 132.68 temperature 10.0 30 > th dose independent rect. 23 5
553 132.68 temperature 30.0 30 < th dose independent rect. 23 5
554 132.68 humidity 50.0 30 > th dose independent rect. 23 5
557 132.68 atmosphere 995.0 30 > th dose independent rect. 23 5
558 132.68 radiation 1.0 30 < th dose independent rect. 23 5
563 132.68 temperature 10.0 30 > th dose independent rect. 4 19
565 132.68 atmosphere 1015.0 30 < th dose independent rect. 4 19
566 132.68 radiation 1.0 30 < th dose dependent rect. 23 5
582 133.07 atmosphere 995.0 30 > th dose independent rect. 9 19
588 133.19 wind 9.0 270 < th dose independent rect. 2 18
608 133.71 wind 9.0 30 < th dose independent rect. 4 19
609 133.73 atmosphere 1015.0 270 < th dose dependent rect. 2 5
615 134.04 precipitation 0.1 270 < th dose independent rect. 2 18
616 134.04 precipitation 0.1 270 < th dose dependent rect. 2 18
617 134.07 atmosphere 995.0 270 > th dose independent rect. 7 19
638 134.36 precipitation 0.1 30 < th dose independent rect. 23 5
639 134.36 precipitation 0.1 30 < th dose dependent rect. 23 5
641 134.43 precipitation 0.1 270 < th dose independent rect. 21 4
643 134.43 precipitation 0.1 270 < th dose dependent rect. 21 4
645 134.44 atmosphere 1015.0 270 < th dose independent rect. 1 20
661 134.78 wind 7.0 270 < th dose independent rect. 21 4
672 135.03 radiation 1.0 270 < th dose dependent rect. 21 4
673 135.04 temperature 10.0 270 > th dose independent rect. 21 4
674 135.04 temperature 30.0 270 < th dose independent rect. 21 4
675 135.04 humidity 50.0 270 > th dose independent rect. 21 4
678 135.04 atmosphere 995.0 270 > th dose independent rect. 21 4
679 135.04 radiation 1.0 270 < th dose independent rect. 21 4
749 135.67 temperature 30.0 30 < th dose dependent rect. 23 5
784 135.76 precipitation 0.1 30 < th dose independent rect. 4 19
785 135.76 precipitation 0.1 30 < th dose dependent rect. 4 19
826 135.84 radiation 30.0 270 < th dose independent rect. 15 15
832 135.97 temperature 10.0 270 > th dose independent rect. 6 9
833 135.97 atmosphere 1015.0 270 < th dose independent rect. 6 9
834 135.97 temperature 10.0 270 > th dose independent rect. 15 15
835 136.04 precipitation 0.1 270 < th dose independent rect. 6 9
836 136.04 precipitation 0.1 270 < th dose dependent rect. 6 9
838 136.05 temperature 30.0 90 < th dose dependent rect. 21 7
869 136.38 wind 9.0 270 < th dose independent rect. 6 9
874 136.43 wind 9.0 270 < th dose independent rect. 1 20
882 136.53 temperature 10.0 270 > th dose dependent rect. 15 16
891 136.63 wind 9.0 270 < th dose independent rect. 15 15
931 136.93 atmosphere 995.0 270 > th dose independent rect. 6 21
935 137.07 humidity 50.0 270 > th dose independent rect. 7 19
936 137.08 atmosphere 995.0 270 > th dose independent rect. 6 9
944 137.21 wind 1.0 270 > th dose independent rect. 7 19
992 138.02 precipitation 0.1 270 < th dose independent rect. 1 20
993 138.02 precipitation 0.1 270 < th dose dependent rect. 1 20
995 138.04 atmosphere 995.0 270 > th dose independent rect. 2 18
1000 138.08 temperature 30.0 270 < th dose dependent rect. 22 3