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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0424700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Disease resistance protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.86 (0.0283) R2 : 0.024
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.199 (0.0596) R2dN8 : 0.031 R2N8 : 0.024
σ : 0.533
deviance : 130.39
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
122.68 0.516 2.84 0.285 0.2 -0.858 -0.28 4.77 0.234 9.03 47 8 -- --
122.68 0.52 2.85 0.254 0.2 0.977 -0.281 -- 0.234 9.03 47 8 -- --
122.94 0.516 2.84 0.278 0.201 -0.959 -- 4.93 0.234 9.23 46.69 7 -- --
122.94 0.52 2.85 0.246 0.201 0.937 -- -- 0.234 9.23 46.87 7 -- --
125.28 0.521 2.84 0.275 -- -0.944 -- 5.07 0.235 -- 46.02 6 -- --
125.41 0.525 2.85 0.29 0.217 -- -0.155 -- 0.23 9.35 -- -- -- --
125.49 0.525 2.85 0.285 0.217 -- -- -- 0.23 9.51 -- -- -- --
125.28 0.524 2.85 0.242 -- 1.01 -- -- 0.235 -- 46.4 2 -- --
124.51 0.523 2.85 -- 0.2 1.03 -- -- 0.207 9.11 46.87 7 -- --
128.27 0.529 2.85 0.283 -- -- -- -- 0.231 -- -- -- -- --
127.63 0.528 2.86 -- 0.217 -- -- -- 0.199 9.41 -- -- -- --
126.81 0.526 2.86 -- -- 1.1 -- -- 0.209 -- 46.87 7 -- --
130.39 0.533 2.86 -- -- -- -- -- 0.199 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 118.52 temperature 10.0 1440 > th dose independent rect. 9 1
4 118.52 atmosphere 995.0 1440 > th dose independent rect. 9 1
7 118.52 atmosphere 1015.0 1440 < th dose independent rect. 9 1
8 118.52 temperature 10.0 1440 > th dose independent rect. 10 23
11 118.73 temperature 25.0 30 > th dose independent rect. 8 1
12 118.78 temperature 20.0 30 > th dose dependent rect. 8 1
13 118.79 humidity 90.0 30 < th dose dependent rect. 8 1
14 118.83 radiation 20.0 30 > th dose independent rect. 8 1
15 118.84 humidity 80.0 30 < th dose independent rect. 8 1
17 118.85 radiation 1.0 30 > th dose dependent rect. 8 1
18 118.86 wind 1.0 30 > th dose independent rect. 8 1
22 118.89 atmosphere 1005.0 30 > th dose dependent rect. 8 1
27 118.92 atmosphere 1000.0 30 > th dose independent rect. 8 1
28 118.92 radiation 30.0 30 < th dose independent rect. 8 1
30 118.95 wind 5.0 30 < th dose independent rect. 8 1
31 118.98 humidity 70.0 30 > th dose independent rect. 8 1
34 119.02 temperature 10.0 30 > th dose independent rect. 8 1
36 119.02 temperature 30.0 30 < th dose independent rect. 8 1
37 119.02 humidity 50.0 30 > th dose independent rect. 8 1
40 119.02 atmosphere 1010.0 30 < th dose independent rect. 8 1
43 119.02 precipitation 0.1 30 < th dose independent rect. 8 1
44 119.02 temperature 10.0 30 > th dose independent rect. 9 23
45 119.02 precipitation 0.1 30 < th dose dependent rect. 8 1
47 119.03 wind 1.0 30 > th dose dependent rect. 8 1
49 119.06 wind 9.0 30 < th dose dependent rect. 8 1
54 119.28 humidity 50.0 30 > th dose dependent rect. 8 1
55 119.29 radiation 40.0 30 < th dose dependent rect. 8 1
60 119.55 atmosphere 1015.0 30 < th dose dependent rect. 8 1
67 119.84 wind 9.0 30 < th dose independent rect. 9 23
77 120.27 temperature 30.0 30 < th dose dependent rect. 8 1
100 120.64 wind 1.0 30 > th dose dependent rect. 6 1
105 120.74 radiation 20.0 30 < th dose dependent rect. 6 1
106 120.77 wind 9.0 4320 > th dose dependent rect. 13 3
107 120.79 temperature 20.0 10 > th dose dependent rect. 6 1
108 120.79 atmosphere 1015.0 30 < th dose dependent rect. 6 1
114 120.90 humidity 90.0 30 < th dose dependent rect. 6 1
119 120.95 radiation 10.0 10 < th dose independent rect. 6 1
124 121.00 temperature 25.0 30 > th dose independent rect. 6 1
125 121.01 atmosphere 1005.0 10 > th dose independent rect. 6 1
130 121.04 wind 5.0 30 < th dose independent rect. 6 1
133 121.04 temperature 10.0 30 > th dose independent rect. 6 1
135 121.04 temperature 30.0 30 < th dose independent rect. 6 1
136 121.04 humidity 50.0 30 > th dose independent rect. 6 1
139 121.04 atmosphere 995.0 30 > th dose independent rect. 6 1
140 121.04 atmosphere 1015.0 30 < th dose independent rect. 6 1
144 121.04 precipitation 0.1 30 < th dose independent rect. 6 1
145 121.04 temperature 10.0 30 > th dose independent rect. 7 23
146 121.04 precipitation 0.1 30 < th dose dependent rect. 6 1
169 121.08 humidity 50.0 30 > th dose dependent rect. 6 1
172 121.10 wind 1.0 30 > th dose independent rect. 6 1
182 121.15 wind 9.0 30 < th dose dependent rect. 6 1
185 121.18 humidity 90.0 30 < th dose independent rect. 6 1
188 121.19 wind 9.0 1440 < th dose independent rect. 7 1
189 121.19 temperature 10.0 1440 > th dose independent rect. 7 1
193 121.19 temperature 30.0 1440 < th dose independent rect. 7 1
197 121.19 humidity 50.0 1440 > th dose independent rect. 7 1
202 121.19 atmosphere 995.0 1440 > th dose independent rect. 7 1
203 121.19 atmosphere 1015.0 1440 < th dose independent rect. 7 1
204 121.19 temperature 10.0 1440 > th dose independent rect. 8 23
211 121.22 atmosphere 995.0 10 > th dose dependent rect. 6 1
213 121.23 radiation 1.0 30 > th dose independent rect. 6 1
218 121.26 radiation 1.0 10 > th dose dependent rect. 6 1
227 121.34 wind 9.0 4320 > th dose independent rect. 13 3
230 121.35 humidity 60.0 90 < th dose dependent rect. 9 1
247 121.41 wind 3.0 720 > th dose independent rect. 2 1
248 121.41 wind 9.0 4320 < th dose independent rect. 14 2
249 121.42 temperature 25.0 270 > th dose independent rect. 13 16
252 121.46 temperature 30.0 30 < th dose dependent rect. 6 1
254 121.48 humidity 60.0 90 < th dose independent rect. 9 1
273 121.52 temperature 25.0 10 > th dose dependent rect. 2 5
279 121.56 wind 9.0 30 < th dose independent rect. 7 23
292 121.62 wind 3.0 720 < th dose independent rect. 2 1
299 121.66 temperature 10.0 30 > th dose dependent rect. 16 13
300 121.69 wind 3.0 14400 > th dose independent rect. 18 20
302 121.69 wind 3.0 14400 < th dose independent rect. 19 21
310 121.71 temperature 25.0 10 > th dose independent rect. 16 14
316 121.72 temperature 25.0 720 > th dose independent rect. 17 2
325 121.75 wind 3.0 14400 > th dose independent sin 13 NA
341 121.78 wind 3.0 14400 < th dose independent sin 13 NA
347 121.80 wind 3.0 14400 > th dose independent rect. 18 10
349 121.80 wind 3.0 14400 > th dose independent rect. 15 18
353 121.81 wind 3.0 14400 > th dose independent rect. 16 16
372 121.83 wind 3.0 14400 > th dose independent rect. 18 13
380 121.84 wind 3.0 14400 < th dose independent rect. 18 9
387 121.84 wind 3.0 14400 < th dose independent rect. 15 18
396 121.84 wind 3.0 720 > th dose dependent rect. 2 1
398 121.85 wind 3.0 14400 < th dose independent rect. 21 1
399 121.85 wind 3.0 14400 < th dose independent rect. 20 4
400 121.85 wind 3.0 14400 < th dose independent rect. 19 7
414 121.85 wind 3.0 14400 < th dose dependent rect. 22 1
426 121.87 wind 3.0 14400 > th dose independent rect. 19 7
433 121.88 wind 3.0 14400 > th dose independent rect. 21 1
447 121.89 wind 3.0 14400 < th dose independent rect. 6 7
449 121.89 wind 3.0 14400 < th dose independent rect. 5 9
476 121.92 wind 3.0 14400 < th dose independent rect. 12 21
477 121.92 atmosphere 995.0 10 > th dose independent rect. 7 23
494 121.93 wind 3.0 14400 > th dose independent rect. 5 9
517 121.94 wind 9.0 4320 > th dose dependent rect. 3 13
520 121.95 wind 3.0 14400 > th dose independent rect. 6 7
527 121.95 wind 3.0 14400 > th dose independent rect. 12 21
531 121.96 wind 3.0 14400 < th dose independent no NA NA
532 121.96 wind 3.0 14400 > th dose independent rect. 20 4
544 121.96 wind 5.0 14400 < th dose dependent rect. 19 21
545 121.97 wind 9.0 720 < th dose independent rect. 15 4
546 121.97 temperature 25.0 90 < th dose independent rect. 16 9
564 121.98 wind 3.0 14400 < th dose independent rect. 3 23
580 122.00 wind 3.0 14400 > th dose independent no NA NA
581 122.00 wind 3.0 14400 < th dose independent sin 3 NA
600 122.01 wind 3.0 14400 > th dose independent sin 4 NA
601 122.01 temperature 25.0 90 > th dose independent rect. 8 3
624 122.02 wind 3.0 14400 > th dose independent rect. 3 23
628 122.02 wind 3.0 14400 < th dose independent rect. 23 23
629 122.02 temperature 20.0 270 > th dose dependent rect. 1 1
630 122.03 temperature 25.0 720 > th dose independent rect. 5 2
651 122.05 atmosphere 1005.0 10 > th dose independent rect. 12 1
679 122.06 wind 5.0 14400 < th dose dependent rect. 16 21
693 122.07 wind 3.0 14400 > th dose independent rect. 23 23
695 122.07 wind 3.0 14400 < th dose dependent rect. 19 7
722 122.09 wind 5.0 14400 < th dose dependent sin 12 NA
740 122.10 wind 3.0 14400 < th dose dependent rect. 7 6
749 122.11 humidity 50.0 720 > th dose independent rect. 19 16
758 122.12 humidity 80.0 43200 < th dose independent rect. 6 3
802 122.13 temperature 20.0 270 > th dose dependent rect. 24 3
803 122.13 wind 5.0 14400 < th dose dependent rect. 18 10
831 122.14 temperature 20.0 90 > th dose dependent rect. 24 5
842 122.15 temperature 20.0 90 > th dose independent rect. 24 5
850 122.15 wind 9.0 720 < th dose independent rect. 7 20
867 122.16 temperature 25.0 10 > th dose independent rect. 6 7
876 122.16 temperature 30.0 720 < th dose dependent rect. 19 1
878 122.16 wind 5.0 14400 < th dose dependent rect. 18 13
918 122.18 humidity 50.0 4320 > th dose independent rect. 10 1
927 122.18 wind 5.0 14400 < th dose dependent rect. 5 9
939 122.19 humidity 50.0 43200 < th dose independent rect. 16 1
959 122.19 wind 1.0 14400 > th dose dependent rect. 21 20
974 122.20 wind 1.0 14400 > th dose dependent sin 12 NA
983 122.20 wind 1.0 14400 > th dose dependent rect. 18 20
994 122.21 temperature 25.0 10 < th dose independent rect. 17 9
995 122.21 humidity 50.0 30 > th dose independent rect. 5 11