Os08g0423400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0423400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 162.31 | 0.599 | 2.93 | -0.469 | 0.253 | 0.517 | -0.233 | -2.35 | -0.0431 | 16.6 | 90.58 | 33 | -- | -- |
| 170.24 | 0.608 | 2.91 | -0.552 | 0.294 | 0.449 | 1.02 | -- | -0.0657 | 15.6 | 89.46 | 40 | -- | -- |
| 162.37 | 0.593 | 2.93 | -0.479 | 0.259 | 0.525 | -- | -2.21 | -0.045 | 16.4 | 90.61 | 28 | -- | -- |
| 173.01 | 0.613 | 2.92 | -0.53 | 0.278 | 0.378 | -- | -- | -0.0751 | 16.5 | 89.44 | 40 | -- | -- |
| 165.11 | 0.598 | 2.93 | -0.437 | -- | 0.415 | -- | -2.22 | -0.0446 | -- | 90.87 | 41 | -- | -- |
| 174.97 | 0.62 | 2.93 | -0.507 | 0.0472 | -- | 0.757 | -- | -0.153 | 14.2 | -- | -- | -- | -- |
| 176.66 | 0.622 | 2.93 | -0.485 | 0.106 | -- | -- | -- | -0.147 | 18.1 | -- | -- | -- | -- |
| 175.77 | 0.617 | 2.92 | -0.517 | -- | 0.21 | -- | -- | -0.113 | -- | 90.89 | 27 | -- | -- |
| 180.31 | 0.625 | 2.91 | -- | 0.257 | 0.314 | -- | -- | -0.0302 | 16.5 | 89.66 | 40 | -- | -- |
| 177.25 | 0.622 | 2.93 | -0.488 | -- | -- | -- | -- | -0.15 | -- | -- | -- | -- | -- |
| 182.85 | 0.633 | 2.92 | -- | 0.114 | -- | -- | -- | -0.0932 | 17.9 | -- | -- | -- | -- |
| 182.69 | 0.63 | 2.91 | -- | -- | 0.156 | -- | -- | -0.0681 | -- | 90.94 | 35 | -- | -- |
| 183.52 | 0.632 | 2.92 | -- | -- | -- | -- | -- | -0.0954 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.57 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 1 |
| 13 | 151.57 | wind | 9 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 43 | 154.39 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 60 | 157.00 | radiation | 30 | 10 | > th | dose independent | rect. | 13 | 1 |
| 80 | 158.87 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 3 |
| 83 | 158.90 | humidity | 90 | 270 | > th | dose dependent | sin | 17 | NA |
| 113 | 159.78 | radiation | 20 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 119 | 160.05 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 124 | 160.25 | humidity | 90 | 270 | > th | dose dependent | rect. | 13 | 9 |
| 126 | 160.32 | humidity | 90 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 139 | 160.59 | humidity | 90 | 90 | > th | dose dependent | rect. | 20 | 10 |
| 140 | 160.60 | humidity | 90 | 270 | > th | dose dependent | rect. | 13 | 14 |
| 147 | 160.72 | humidity | 90 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 187 | 161.18 | humidity | 70 | 270 | > th | dose dependent | rect. | 17 | 12 |
| 193 | 161.22 | humidity | 90 | 30 | > th | dose dependent | rect. | 13 | 18 |
| 225 | 161.48 | humidity | 90 | 90 | > th | dose independent | rect. | 21 | 1 |
| 235 | 161.55 | humidity | 90 | 90 | > th | dose independent | rect. | 20 | 10 |
| 242 | 161.58 | humidity | 90 | 30 | > th | dose dependent | rect. | 9 | 22 |
| 250 | 161.62 | humidity | 80 | 720 | > th | dose independent | rect. | 17 | 4 |
| 275 | 161.71 | humidity | 80 | 720 | > th | dose independent | rect. | 16 | 6 |
| 281 | 161.74 | humidity | 90 | 10 | > th | dose independent | rect. | 21 | 1 |
| 296 | 161.81 | humidity | 90 | 30 | > th | dose dependent | rect. | 21 | 17 |
| 346 | 162.03 | humidity | 90 | 30 | > th | dose dependent | rect. | 13 | 10 |
| 357 | 162.08 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 14 |
| 374 | 162.16 | humidity | 90 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 428 | 162.34 | humidity | 80 | 720 | < th | dose independent | rect. | 14 | 19 |
| 437 | 162.39 | humidity | 90 | 30 | > th | dose dependent | rect. | 18 | 20 |
| 468 | 162.46 | humidity | 90 | 30 | > th | dose dependent | no | NA | NA |
| 471 | 162.46 | humidity | 90 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 497 | 162.52 | humidity | 90 | 30 | > th | dose dependent | rect. | 18 | 16 |
| 515 | 162.57 | humidity | 60 | 720 | > th | dose dependent | sin | 15 | NA |
| 615 | 162.79 | humidity | 90 | 270 | > th | dose independent | rect. | 13 | 15 |
| 624 | 162.82 | humidity | 90 | 720 | < th | dose dependent | rect. | 14 | 19 |
| 667 | 162.93 | humidity | 90 | 30 | > th | dose independent | rect. | 13 | 18 |
| 719 | 163.03 | humidity | 90 | 270 | > th | dose independent | sin | 15 | NA |
| 842 | 163.32 | humidity | 80 | 720 | < th | dose independent | rect. | 14 | 7 |
| 852 | 163.34 | humidity | 90 | 720 | < th | dose dependent | sin | 13 | NA |
| 862 | 163.35 | humidity | 50 | 720 | > th | dose dependent | rect. | 10 | 19 |
| 958 | 163.56 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 1 |