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Os08g0422900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.97 (0.022) R2 : 0.576
β1 : -1.63 (0.0805) R2dD : 0.395 R2D : 0.442
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.488 (0.0469) R2dN8 : 0.135 R2N8 : 0.181
σ : 0.412
deviance : 77.9
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
68.33 0.388 7.99 -1.55 0.249 0.656 0.299 -0.666 0.414 19.3 63.01 302 -- --
67.89 0.384 7.99 -1.54 0.361 0.652 0.346 -- 0.469 19 66 393 -- --
68.31 0.385 7.99 -1.55 0.271 0.64 -- -0.559 0.435 19.3 64 321 -- --
68.28 0.385 7.99 -1.56 0.347 0.625 -- -- 0.466 19.2 67 398 -- --
71.3 0.393 7.98 -1.56 -- 0.539 -- -0.791 0.431 -- 64 281 -- --
75.98 0.409 7.98 -1.64 0.165 -- -0.209 -- 0.485 23.7 -- -- -- --
76.16 0.409 7.98 -1.63 0.167 -- -- -- 0.486 23.3 -- -- -- --
71.8 0.395 7.98 -1.59 -- 0.444 -- -- 0.442 -- 64.05 308 -- --
131.92 0.535 7.95 -- 0.453 0.821 -- -- 0.635 18.7 67 399 -- --
77.9 0.412 7.97 -1.63 -- -- -- -- 0.488 -- -- -- -- --
146.39 0.566 7.94 -- 0.153 -- -- -- 0.668 22.6 -- -- -- --
119.08 0.508 8.02 -- -- 1.07 -- -- 0.437 -- 50 4389 -- --
147.83 0.568 7.93 -- -- -- -- -- 0.668 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 64.40 humidity 60.0 270 > th dose independent rect. 7 17
14 65.59 precipitation 0.1 14400 < th dose independent rect. 5 5
15 65.59 precipitation 0.1 14400 < th dose dependent rect. 5 5
18 65.67 precipitation 0.1 14400 < th dose independent rect. 4 7
19 65.67 precipitation 0.1 14400 < th dose dependent rect. 4 7
20 65.72 humidity 70.0 270 > th dose independent rect. 15 10
26 65.87 precipitation 0.1 14400 > th dose independent rect. 4 7
27 65.89 precipitation 0.1 14400 > th dose independent rect. 5 5
30 65.90 precipitation 0.1 14400 > th dose dependent rect. 5 5
37 66.01 humidity 60.0 270 > th dose independent rect. 17 22
40 66.04 precipitation 0.1 14400 < th dose independent rect. 6 2
41 66.04 precipitation 0.1 14400 < th dose dependent rect. 6 2
43 66.08 temperature 30.0 270 < th dose independent rect. 7 17
48 66.14 temperature 30.0 270 < th dose independent rect. 6 19
55 66.23 humidity 60.0 270 > th dose independent rect. 17 9
69 66.45 radiation 40.0 270 < th dose independent rect. 6 7
83 66.58 radiation 40.0 270 < th dose independent rect. 19 17
84 66.58 humidity 90.0 14400 > th dose dependent rect. 9 7
85 66.59 precipitation 0.1 14400 < th dose independent rect. 4 11
87 66.59 precipitation 0.1 14400 < th dose dependent rect. 4 11
89 66.62 precipitation 0.1 14400 > th dose independent rect. 4 11
101 66.67 temperature 30.0 270 < th dose independent rect. 17 9
108 66.71 humidity 90.0 14400 > th dose dependent rect. 6 11
111 66.73 humidity 90.0 270 < th dose dependent rect. 12 7
117 66.74 humidity 90.0 14400 > th dose dependent rect. 13 3
121 66.75 radiation 10.0 270 < th dose dependent rect. 15 11
132 66.83 humidity 90.0 14400 > th dose dependent rect. 11 6
144 66.87 precipitation 0.1 14400 < th dose independent sin 4 NA
145 66.87 humidity 90.0 14400 > th dose independent rect. 12 5
147 66.87 precipitation 0.1 14400 < th dose dependent sin 4 NA
148 66.88 precipitation 0.1 14400 > th dose independent sin 4 NA
150 66.88 humidity 90.0 14400 < th dose independent rect. 11 3
153 66.89 precipitation 0.1 14400 < th dose independent rect. 14 1
157 66.89 precipitation 0.1 14400 < th dose dependent rect. 14 1
162 66.90 precipitation 0.1 14400 > th dose independent rect. 24 16
169 66.94 precipitation 0.1 14400 > th dose independent rect. 6 2
171 66.94 precipitation 0.1 14400 < th dose independent rect. 24 16
173 66.94 precipitation 0.1 14400 > th dose dependent rect. 6 2
175 66.94 precipitation 0.1 14400 < th dose dependent rect. 24 16
176 66.95 humidity 90.0 14400 > th dose independent rect. 9 7
178 66.95 radiation 1.0 270 < th dose independent rect. 5 21
188 66.97 radiation 1.0 270 < th dose independent rect. 12 14
197 66.99 humidity 60.0 270 > th dose independent rect. 6 9
225 67.04 humidity 90.0 270 < th dose dependent rect. 15 1
238 67.08 humidity 90.0 14400 < th dose independent rect. 10 5
242 67.09 precipitation 0.1 14400 > th dose independent rect. 24 13
246 67.10 humidity 90.0 14400 > th dose independent rect. 13 1
253 67.11 humidity 90.0 14400 > th dose dependent sin 0 NA
260 67.12 humidity 50.0 270 > th dose dependent rect. 7 17
264 67.13 precipitation 0.1 14400 < th dose independent rect. 24 13
266 67.13 precipitation 0.1 14400 < th dose dependent rect. 24 13
268 67.14 precipitation 0.1 14400 > th dose independent rect. 14 1
274 67.14 precipitation 0.1 14400 > th dose dependent rect. 14 1
289 67.17 radiation 1.0 270 < th dose dependent rect. 5 21
333 67.27 atmosphere 995.0 90 > th dose dependent rect. 7 8
336 67.27 precipitation 0.1 14400 > th dose dependent rect. 4 12
341 67.28 wind 1.0 270 > th dose independent rect. 13 16
348 67.29 humidity 70.0 270 < th dose independent rect. 12 8
405 67.36 radiation 40.0 270 < th dose independent rect. 7 17
413 67.38 temperature 25.0 14400 < th dose dependent rect. 8 1
443 67.42 humidity 70.0 270 > th dose independent sin 16 NA
472 67.46 humidity 80.0 270 < th dose dependent rect. 12 17
477 67.47 temperature 25.0 14400 < th dose dependent rect. 7 3
481 67.47 precipitation 0.1 14400 > th dose dependent rect. 24 13
482 67.47 radiation 1.0 270 < th dose dependent rect. 12 14
489 67.48 radiation 1.0 270 > th dose independent rect. 11 19
495 67.49 radiation 1.0 270 < th dose independent sin 16 NA
498 67.49 humidity 50.0 270 > th dose dependent rect. 16 9
511 67.49 precipitation 0.1 14400 > th dose dependent rect. 24 16
522 67.51 humidity 70.0 270 < th dose independent sin 17 NA
525 67.51 humidity 90.0 14400 > th dose independent rect. 6 11
545 67.52 humidity 90.0 14400 > th dose dependent rect. 2 20
605 67.58 radiation 1.0 4320 < th dose independent rect. 18 21
616 67.59 temperature 30.0 270 < th dose independent rect. 17 20
623 67.60 radiation 1.0 4320 > th dose independent rect. 18 21
630 67.61 radiation 1.0 4320 < th dose independent rect. 5 10
635 67.61 radiation 1.0 4320 < th dose independent rect. 20 19
636 67.61 precipitation 0.1 14400 > th dose dependent sin 4 NA
644 67.62 radiation 1.0 4320 < th dose independent rect. 22 17
650 67.62 temperature 30.0 14400 < th dose dependent rect. 10 1
651 67.62 temperature 30.0 14400 < th dose dependent rect. 9 4
655 67.63 humidity 70.0 270 < th dose independent rect. 15 1
665 67.64 atmosphere 995.0 90 > th dose independent rect. 7 8
666 67.64 radiation 1.0 4320 > th dose independent rect. 5 10
667 67.64 radiation 1.0 4320 < th dose independent rect. 24 15
676 67.64 atmosphere 1015.0 270 < th dose dependent rect. 1 17
682 67.65 radiation 1.0 4320 < th dose independent rect. 2 13
688 67.66 temperature 15.0 270 > th dose independent rect. 17 9
703 67.66 humidity 90.0 90 < th dose dependent rect. 15 5
717 67.68 temperature 30.0 270 < th dose independent rect. 6 7
718 67.68 precipitation 0.1 90 < th dose independent rect. 7 8
727 67.68 precipitation 0.1 90 < th dose dependent rect. 7 8
736 67.69 temperature 30.0 270 < th dose independent rect. 18 17
737 67.69 temperature 30.0 14400 < th dose dependent rect. 12 1
779 67.73 humidity 90.0 14400 > th dose independent sin 1 NA
797 67.73 radiation 1.0 270 > th dose independent rect. 10 21
798 67.73 radiation 1.0 270 < th dose dependent sin 17 NA
804 67.74 temperature 25.0 14400 > th dose independent rect. 11 2
809 67.74 radiation 1.0 1440 < th dose dependent rect. 20 7
815 67.75 temperature 25.0 14400 > th dose independent rect. 8 5
816 67.75 humidity 90.0 14400 < th dose independent rect. 6 10
845 67.77 wind 7.0 270 < th dose independent rect. 13 17
850 67.78 wind 7.0 270 < th dose independent rect. 6 7
861 67.79 temperature 25.0 14400 < th dose independent rect. 8 5
877 67.80 temperature 25.0 14400 < th dose independent rect. 7 9
912 67.81 humidity 90.0 14400 > th dose dependent rect. 6 23
913 67.82 radiation 1.0 4320 < th dose independent sin 5 NA
931 67.82 radiation 1.0 4320 < th dose independent rect. 18 16
951 67.83 radiation 1.0 4320 > th dose independent sin 5 NA
974 67.84 temperature 25.0 14400 > th dose independent rect. 4 12
984 67.84 precipitation 0.1 90 < th dose independent rect. 15 16
985 67.84 precipitation 0.1 270 < th dose independent rect. 13 17
986 67.84 temperature 10.0 14400 > th dose dependent rect. 9 1
991 67.84 precipitation 0.1 90 < th dose dependent rect. 15 16
992 67.84 precipitation 0.1 270 < th dose dependent rect. 13 17
997 67.85 temperature 25.0 14400 < th dose independent rect. 11 2