Os08g0422200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cation efflux protein family protein.
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Os08g0422200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cation efflux protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.77 | 0.409 | 7.34 | 1.31 | 0.309 | 0.88 | 0.103 | -0.516 | -0.0365 | 15.5 | 74 | 1298 | -- | -- |
| 76.08 | 0.406 | 7.33 | 1.27 | 0.315 | 0.854 | 0.0493 | -- | -0.0412 | 15.3 | 74.48 | 1308 | -- | -- |
| 75.8 | 0.405 | 7.34 | 1.31 | 0.309 | 0.879 | -- | -0.491 | -0.0373 | 15.5 | 74.03 | 1302 | -- | -- |
| 76.07 | 0.406 | 7.34 | 1.26 | 0.312 | 0.865 | -- | -- | -0.0465 | 15.4 | 74.99 | 1302 | -- | -- |
| 80.16 | 0.417 | 7.33 | 1.29 | -- | 1.01 | -- | -0.428 | -0.0331 | -- | 74 | 1213 | -- | -- |
| 86.16 | 0.435 | 7.36 | 1.3 | 0.403 | -- | 0.0937 | -- | -0.138 | 15.2 | -- | -- | -- | -- |
| 86.19 | 0.435 | 7.36 | 1.3 | 0.403 | -- | -- | -- | -0.137 | 15.2 | -- | -- | -- | -- |
| 80.43 | 0.418 | 7.33 | 1.25 | -- | 1 | -- | -- | -0.0405 | -- | 74.22 | 1213 | -- | -- |
| 113.8 | 0.497 | 7.35 | -- | 0.29 | 0.991 | -- | -- | -0.0984 | 15.3 | 86 | 1348 | -- | -- |
| 95.45 | 0.457 | 7.36 | 1.28 | -- | -- | -- | -- | -0.148 | -- | -- | -- | -- | -- |
| 130.66 | 0.535 | 7.39 | -- | 0.378 | -- | -- | -- | -0.282 | 15.1 | -- | -- | -- | -- |
| 117.62 | 0.505 | 7.35 | -- | -- | 1.12 | -- | -- | -0.11 | -- | 84.05 | 1226 | -- | -- |
| 138.79 | 0.55 | 7.39 | -- | -- | -- | -- | -- | -0.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.95 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 22 | 19 |
| 7 | 74.15 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 17 |
| 9 | 74.18 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 23 | 17 |
| 97 | 75.16 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 98 | 75.17 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 9 |
| 103 | 75.21 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 107 | 75.23 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 118 | 75.29 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 15 | 15 |
| 157 | 75.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 160 | 75.52 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 162 | 75.53 | temperature | 25.0 | 1440 | < th | dose independent | sin | 13 | NA |
| 163 | 75.53 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 180 | 75.65 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 188 | 75.69 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 192 | 75.70 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 199 | 75.72 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 202 | 75.73 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 220 | 75.80 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 15 | 19 |
| 221 | 75.81 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 226 | 75.82 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 13 |
| 228 | 75.82 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 20 |
| 230 | 75.82 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 244 | 75.88 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 12 | 18 |
| 251 | 75.89 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 15 | 15 |
| 275 | 75.96 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 299 | 76.02 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 9 | 21 |
| 300 | 76.03 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 320 | 76.08 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 16 | 14 |
| 329 | 76.11 | temperature | 25.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 367 | 76.20 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 397 | 76.27 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 418 | 76.30 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 434 | 76.33 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 17 | 6 |
| 436 | 76.33 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 464 | 76.38 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 517 | 76.46 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 526 | 76.48 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 531 | 76.49 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 532 | 76.49 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 570 | 76.54 | humidity | 70.0 | 1440 | > th | dose dependent | no | NA | NA |
| 579 | 76.56 | humidity | 90.0 | 1440 | > th | dose independent | sin | 14 | NA |
| 595 | 76.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 598 | 76.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 605 | 76.60 | humidity | 90.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 612 | 76.61 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 627 | 76.63 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 628 | 76.63 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 642 | 76.65 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 7 |
| 651 | 76.66 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 9 | 16 |
| 659 | 76.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 678 | 76.70 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 690 | 76.71 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 694 | 76.71 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 709 | 76.73 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 4 | 21 |
| 712 | 76.74 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 738 | 76.77 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 796 | 76.82 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 837 | 76.85 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 841 | 76.86 | temperature | 25.0 | 1440 | < th | dose independent | no | NA | NA |
| 844 | 76.86 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 12 | 18 |
| 859 | 76.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 863 | 76.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 864 | 76.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 6 |
| 889 | 76.90 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 904 | 76.90 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 928 | 76.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 983 | 76.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 994 | 76.96 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 995 | 76.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 6 |