Os08g0418600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0418600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.46 | 0.478 | 3.09 | -0.162 | 0.046 | -0.215 | -0.466 | 2.84 | 0.137 | 3.35 | 0.4404 | 4 | -- | -- |
| 106.43 | 0.48 | 3.1 | -0.177 | 0.0351 | 0.394 | -0.32 | -- | 0.149 | 3.43 | 3.083e-05 | 6 | -- | -- |
| 103.91 | 0.475 | 3.09 | -0.164 | 0.0842 | -0.211 | -- | 2.65 | 0.123 | 6.23 | 0.2195 | 4 | -- | -- |
| 106.64 | 0.481 | 3.1 | -0.153 | 0.0456 | 0.364 | -- | -- | 0.135 | 5.01 | 0.001438 | 7 | -- | -- |
| 104.21 | 0.475 | 3.09 | -0.15 | -- | -0.193 | -- | 2.63 | 0.141 | -- | 0.2335 | 4 | -- | -- |
| 107.27 | 0.486 | 3.1 | -0.148 | 0.0764 | -- | -0.232 | -- | 0.138 | 4.87 | -- | -- | -- | -- |
| 107.38 | 0.485 | 3.1 | -0.147 | 0.0786 | -- | -- | -- | 0.14 | 5.84 | -- | -- | -- | -- |
| 106.63 | 0.481 | 3.1 | -0.168 | -- | 0.306 | -- | -- | 0.147 | -- | 1.185 | 4 | -- | -- |
| 107.3 | 0.482 | 3.09 | -- | 0.0649 | 0.311 | -- | -- | 0.161 | 5.74 | 0.1 | 7 | -- | -- |
| 107.7 | 0.485 | 3.1 | -0.144 | -- | -- | -- | -- | 0.141 | -- | -- | -- | -- | -- |
| 107.95 | 0.486 | 3.09 | -- | 0.0764 | -- | -- | -- | 0.156 | 5.93 | -- | -- | -- | -- |
| 107.37 | 0.484 | 3.09 | -- | -- | 0.265 | -- | -- | 0.164 | -- | 1.185 | 4 | -- | -- |
| 108.25 | 0.486 | 3.09 | -- | -- | -- | -- | -- | 0.157 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.17 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 5 | 94.17 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 9 | 94.31 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 27 | 94.64 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 2 |
| 32 | 95.00 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 2 |
| 42 | 95.79 | wind | 9.0 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 44 | 95.83 | wind | 9.0 | 90 | > th | dose dependent | rect. | 19 | 15 |
| 71 | 97.54 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 113 | 99.09 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 114 | 99.16 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 121 | 99.32 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 170 | 100.12 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 171 | 100.13 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 183 | 100.26 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 185 | 100.28 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 189 | 100.33 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 191 | 100.33 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 192 | 100.33 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 196 | 100.33 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 198 | 100.33 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 203 | 100.33 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 204 | 100.33 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 205 | 100.33 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 210 | 100.33 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 211 | 100.35 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 217 | 100.42 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 219 | 100.43 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 234 | 100.64 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 253 | 100.76 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 254 | 100.76 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 257 | 100.76 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 262 | 100.76 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 271 | 100.76 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 272 | 100.76 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 292 | 100.76 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 295 | 100.76 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 344 | 101.46 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 360 | 101.64 | wind | 9.0 | 90 | > th | dose independent | rect. | 19 | 15 |
| 445 | 102.29 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 483 | 102.63 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 2 |
| 493 | 102.68 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 500 | 102.68 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 503 | 102.68 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 573 | 103.00 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 575 | 103.01 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 631 | 103.41 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 702 | 103.61 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 6 |
| 720 | 103.64 | wind | 9.0 | 4320 | < th | dose independent | rect. | 1 | 2 |
| 741 | 103.72 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 757 | 103.78 | wind | 9.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 780 | 103.85 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 800 | 103.90 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 812 | 103.94 | wind | 3.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 823 | 103.97 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 828 | 103.98 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 841 | 104.01 | wind | 3.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 853 | 104.04 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 2 |
| 864 | 104.07 | wind | 9.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 894 | 104.11 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 915 | 104.17 | wind | 3.0 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 921 | 104.17 | wind | 1.0 | 10 | < th | dose dependent | rect. | 24 | 9 |
| 944 | 104.21 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 2 |
| 956 | 104.24 | radiation | 10.0 | 90 | > th | dose independent | rect. | 9 | 1 |
| 975 | 104.27 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 5 |
| 996 | 104.30 | humidity | 90.0 | 270 | > th | dose independent | rect. | 6 | 3 |
| 998 | 104.30 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 16 | 14 |