Os08g0417000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 2OG-Fe(II) oxygenase domain containing protein.
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Os08g0417000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 2OG-Fe(II) oxygenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 503.64 | 1.05 | 7.28 | 1.21 | 1.4 | -3.61 | 0.0671 | -2.93 | 0.179 | 2.53 | 24.81 | 740 | -- | -- |
| 515.41 | 1.06 | 7.33 | 0.81 | 1.46 | -3.13 | 0.395 | -- | 0.135 | 2.42 | 25.2 | 739 | -- | -- |
| 503.63 | 1.05 | 7.28 | 1.22 | 1.4 | -3.62 | -- | -3 | 0.185 | 2.5 | 24.72 | 744 | -- | -- |
| 515.27 | 1.06 | 7.35 | 0.713 | 1.43 | -3.32 | -- | -- | 0.058 | 2.55 | 25.14 | 722 | -- | -- |
| 597.8 | 1.14 | 7.3 | 1.15 | -- | -4.12 | -- | -3.25 | 0.0849 | -- | 25.56 | 955 | -- | -- |
| 678.2 | 1.22 | 7.2 | 1.65 | 1.67 | -- | 0.308 | -- | 0.765 | 1.5 | -- | -- | -- | -- |
| 678.58 | 1.22 | 7.2 | 1.64 | 1.67 | -- | -- | -- | 0.763 | 1.51 | -- | -- | -- | -- |
| 608.38 | 1.15 | 7.38 | 0.57 | -- | -3.91 | -- | -- | -0.0932 | -- | 26.51 | 962 | -- | -- |
| 526.91 | 1.07 | 7.38 | -- | 1.38 | -3.61 | -- | -- | -0.0669 | 2.64 | 25.3 | 767 | -- | -- |
| 849.91 | 1.36 | 7.18 | 1.71 | -- | -- | -- | -- | 0.799 | -- | -- | -- | -- | -- |
| 749.87 | 1.28 | 7.24 | -- | 1.7 | -- | -- | -- | 0.58 | 1.54 | -- | -- | -- | -- |
| 615.51 | 1.16 | 7.4 | -- | -- | -4.13 | -- | -- | -0.185 | -- | 26.4 | 968 | -- | -- |
| 927.17 | 1.42 | 7.22 | -- | -- | -- | -- | -- | 0.609 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 502.75 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 3 | 503.08 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 7 | 503.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 18 | 504.05 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 22 | 504.25 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 33 | 504.85 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 47 | 505.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 53 | 506.06 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 96 | 509.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 116 | 510.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 142 | 511.35 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 143 | 511.36 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 144 | 511.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 168 | 512.17 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 360 | 516.38 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 658 | 522.53 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 664 | 522.61 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 689 | 523.19 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 720 | 523.95 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 723 | 524.03 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 794 | 525.41 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 862 | 526.42 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |