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Os08g0413500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0183) R2 : 0.577
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.06 (0.0441) R2dC : 0.537 R2C : 0.522
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.261 (0.0384) R2dN8 : 0.0554 R2N8 : 0.0398
σ : 0.344
deviance : 54.2
__
_____
C
peak time of C : 22.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
48.86 0.328 11.3 -0.164 1.03 -0.356 -0.679 1.26 -0.303 22.2 64 11 -- --
49.94 0.332 11.3 -0.154 0.994 -0.264 -0.898 -- -0.277 21.9 90 22 -- --
50.36 0.333 11.3 -0.106 0.994 -0.291 -- 1.22 -0.271 21.9 92.05 4 -- --
53.05 0.341 11.3 -0.12 1 -0.243 -- -- -0.275 22 90 16 -- --
101.63 0.472 11.3 -0.0946 -- -0.84 -- 1.41 -0.271 -- 92.05 4 -- --
50.85 0.334 11.3 -0.159 1.06 -- -0.853 -- -0.277 22.3 -- -- -- --
53.78 0.343 11.3 -0.126 1.06 -- -- -- -0.275 22.4 -- -- -- --
105.04 0.477 11.3 -0.108 -- -0.798 -- -- -0.289 -- 88.05 2 -- --
53.43 0.342 11.3 -- 1 -0.249 -- -- -0.262 21.9 90 15 -- --
122.36 0.517 11.3 -0.109 -- -- -- -- -0.272 -- -- -- -- --
54.2 0.344 11.3 -- 1.06 -- -- -- -0.261 22.3 -- -- -- --
105.16 0.479 11.3 -- -- -0.816 -- -- -0.282 -- 87.12 2 -- --
122.67 0.517 11.3 -- -- -- -- -- -0.26 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.30 temperature 25.0 90 > th dose dependent rect. 20 11
3 44.59 atmosphere 1005.0 30 > th dose dependent rect. 17 6
6 44.76 temperature 25.0 10 > th dose dependent rect. 18 13
17 46.09 wind 1.0 30 > th dose independent rect. 23 6
18 46.16 atmosphere 1005.0 30 > th dose dependent rect. 20 3
19 46.17 atmosphere 1005.0 270 > th dose dependent rect. 18 1
24 46.32 atmosphere 1000.0 30 > th dose independent rect. 5 18
28 46.35 atmosphere 995.0 30 > th dose dependent rect. 5 18
30 46.41 temperature 25.0 30 > th dose independent rect. 20 3
32 46.41 atmosphere 1005.0 30 > th dose dependent rect. 14 9
38 46.51 temperature 25.0 90 > th dose dependent rect. 20 7
39 46.54 temperature 25.0 90 > th dose dependent rect. 20 4
44 46.56 temperature 25.0 30 > th dose dependent rect. 22 9
45 46.56 radiation 1.0 30 < th dose dependent rect. 23 18
50 46.60 radiation 1.0 10 < th dose independent rect. 23 17
55 46.61 temperature 25.0 30 > th dose independent rect. 18 13
63 46.65 radiation 1.0 30 < th dose dependent rect. 23 15
70 46.69 temperature 25.0 90 > th dose dependent rect. 18 9
73 46.69 humidity 50.0 10 > th dose dependent rect. 7 22
77 46.73 radiation 1.0 30 < th dose independent rect. 23 15
82 46.74 radiation 1.0 10 < th dose independent rect. 23 7
85 46.74 radiation 1.0 30 < th dose dependent rect. 23 9
93 46.75 humidity 90.0 30 < th dose independent rect. 5 18
97 46.77 radiation 1.0 10 < th dose dependent rect. 23 7
103 46.78 temperature 25.0 270 > th dose dependent rect. 18 6
107 46.79 humidity 50.0 30 > th dose dependent rect. 23 18
111 46.81 radiation 1.0 30 < th dose independent rect. 23 13
115 46.81 humidity 50.0 90 > th dose dependent rect. 7 10
140 46.86 temperature 25.0 30 > th dose independent rect. 20 11
142 46.87 humidity 60.0 30 > th dose independent rect. 7 22
143 46.88 wind 1.0 30 > th dose independent rect. 23 21
146 46.90 wind 5.0 30 < th dose independent rect. 23 6
147 46.90 humidity 60.0 720 > th dose independent rect. 21 14
150 46.92 atmosphere 1005.0 30 > th dose independent rect. 20 3
154 46.95 precipitation 0.1 10 < th dose independent rect. 5 18
155 46.95 precipitation 0.1 10 < th dose dependent rect. 5 18
159 46.96 temperature 25.0 90 > th dose independent rect. 17 7
168 47.00 temperature 10.0 10 > th dose independent rect. 23 6
169 47.00 temperature 30.0 10 < th dose independent rect. 23 6
170 47.00 humidity 50.0 10 > th dose independent rect. 23 6
173 47.00 atmosphere 995.0 10 > th dose independent rect. 23 6
179 47.00 temperature 10.0 10 > th dose independent rect. 5 18
181 47.00 atmosphere 1015.0 10 < th dose independent rect. 5 18
185 47.01 precipitation 0.1 30 < th dose independent rect. 23 6
191 47.01 precipitation 0.1 30 < th dose dependent rect. 23 6
192 47.01 temperature 25.0 10 > th dose dependent rect. 18 10
208 47.02 humidity 60.0 30 > th dose independent rect. 23 21
215 47.03 atmosphere 1015.0 10 < th dose independent rect. 23 6
216 47.03 temperature 25.0 30 > th dose independent rect. 18 10
245 47.12 humidity 90.0 30 < th dose independent rect. 20 3
252 47.14 temperature 25.0 30 > th dose independent rect. 20 8
266 47.17 radiation 1.0 30 < th dose dependent rect. 23 21
269 47.19 atmosphere 1005.0 30 > th dose independent rect. 18 5
274 47.19 wind 9.0 10 < th dose independent rect. 5 18
276 47.20 radiation 40.0 720 < th dose independent rect. 23 10
286 47.21 humidity 50.0 30 > th dose dependent rect. 23 21
293 47.23 wind 1.0 90 > th dose independent rect. 23 18
294 47.23 radiation 40.0 10 < th dose independent rect. 7 22
314 47.27 humidity 50.0 30 > th dose dependent rect. 23 15
317 47.28 humidity 60.0 30 > th dose independent rect. 23 18
322 47.29 humidity 60.0 90 > th dose independent rect. 7 10
324 47.29 temperature 10.0 10 > th dose dependent rect. 23 6
354 47.35 atmosphere 995.0 90 > th dose dependent rect. 17 14
360 47.37 humidity 50.0 10 > th dose dependent rect. 23 6
362 47.38 radiation 10.0 720 > th dose independent rect. 11 1
363 47.38 temperature 25.0 270 > th dose dependent rect. 20 1
374 47.40 atmosphere 1005.0 10 > th dose independent rect. 5 3
385 47.42 temperature 25.0 10 > th dose independent rect. 1 4
392 47.43 radiation 40.0 10 < th dose dependent rect. 7 22
397 47.46 wind 7.0 1440 < th dose independent rect. 5 1
399 47.46 temperature 10.0 1440 > th dose independent rect. 5 1
402 47.46 temperature 30.0 1440 < th dose independent rect. 5 1
406 47.46 humidity 50.0 1440 > th dose independent rect. 5 1
415 47.46 atmosphere 995.0 1440 > th dose independent rect. 5 1
416 47.46 atmosphere 1015.0 1440 < th dose independent rect. 5 1
417 47.46 radiation 20.0 1440 < th dose independent rect. 5 1
426 47.46 temperature 10.0 1440 > th dose independent rect. 6 23
451 47.53 radiation 1.0 10 > th dose dependent rect. 18 13
454 47.54 radiation 1.0 10 > th dose dependent rect. 5 2
470 47.55 humidity 90.0 720 < th dose dependent rect. 11 1
484 47.58 atmosphere 1000.0 10 > th dose independent rect. 5 10
486 47.58 wind 9.0 10 < th dose dependent rect. 23 6
488 47.58 humidity 50.0 10 > th dose dependent rect. 10 19
490 47.59 radiation 40.0 30 < th dose dependent rect. 23 18
500 47.62 temperature 15.0 30 > th dose dependent rect. 20 11
506 47.64 humidity 60.0 30 > th dose independent rect. 7 13
507 47.64 atmosphere 1000.0 10 > th dose independent rect. 5 23
511 47.65 humidity 60.0 30 > th dose independent rect. 23 23
515 47.66 radiation 1.0 30 < th dose independent rect. 23 21
516 47.66 wind 1.0 30 > th dose independent rect. 23 23
517 47.66 temperature 25.0 10 > th dose dependent rect. 4 1
521 47.67 atmosphere 1005.0 270 > th dose independent rect. 17 3
529 47.68 humidity 70.0 10 > th dose independent rect. 23 15
531 47.68 temperature 25.0 90 > th dose dependent rect. 4 1
532 47.68 atmosphere 1000.0 10 > th dose dependent rect. 5 3
535 47.68 temperature 10.0 10 > th dose dependent rect. 5 18
537 47.69 radiation 1.0 10 > th dose independent rect. 5 2
560 47.70 wind 1.0 30 > th dose independent rect. 7 22
571 47.72 wind 1.0 10 > th dose dependent rect. 4 1
579 47.73 radiation 40.0 10 < th dose dependent rect. 23 12
584 47.74 humidity 50.0 30 > th dose dependent rect. 7 13
586 47.74 wind 9.0 30 < th dose dependent rect. 5 18
587 47.75 temperature 25.0 10 > th dose independent rect. 4 1
588 47.75 temperature 25.0 90 > th dose independent rect. 4 1
594 47.76 wind 1.0 10 > th dose independent rect. 4 1
602 47.77 humidity 80.0 720 < th dose independent rect. 11 1
603 47.77 radiation 40.0 720 < th dose independent rect. 7 2
606 47.77 wind 1.0 30 > th dose independent rect. 23 10
608 47.77 humidity 60.0 30 > th dose independent rect. 21 23
637 47.80 humidity 90.0 1440 < th dose dependent rect. 1 11
654 47.83 temperature 25.0 30 > th dose dependent rect. 1 4
681 47.87 temperature 25.0 270 > th dose independent rect. 20 1
694 47.87 wind 1.0 90 > th dose independent rect. 15 14
696 47.87 radiation 40.0 720 < th dose independent rect. 16 17
700 47.87 humidity 80.0 1440 < th dose dependent rect. 20 16
710 47.88 humidity 50.0 30 > th dose dependent rect. 23 23
711 47.89 humidity 90.0 10 < th dose independent rect. 4 1
715 47.89 radiation 1.0 10 < th dose dependent sin 6 NA
716 47.89 temperature 25.0 4320 > th dose dependent rect. 5 1
728 47.90 humidity 50.0 30 > th dose dependent rect. 10 7
729 47.90 radiation 1.0 30 < th dose dependent rect. 21 23
751 47.92 atmosphere 1015.0 10 < th dose dependent rect. 23 6
759 47.93 humidity 60.0 10 > th dose independent rect. 10 19
773 47.94 radiation 1.0 4320 < th dose dependent rect. 21 3
777 47.94 humidity 50.0 30 > th dose dependent rect. 21 23
778 47.95 wind 5.0 30 < th dose independent rect. 20 3
789 47.95 radiation 1.0 30 < th dose dependent rect. 23 23
793 47.96 atmosphere 1000.0 10 > th dose independent rect. 7 23
802 47.97 humidity 50.0 30 > th dose independent rect. 5 18
811 47.98 radiation 1.0 10 > th dose independent sin 6 NA
818 47.98 radiation 40.0 10 < th dose independent rect. 23 21
849 48.00 atmosphere 1005.0 10 > th dose independent rect. 5 5
868 48.01 radiation 1.0 10 < th dose independent sin 6 NA
871 48.01 wind 1.0 30 > th dose independent rect. 12 17
887 48.02 atmosphere 1000.0 270 > th dose independent rect. 17 14
896 48.02 atmosphere 995.0 10 > th dose dependent rect. 20 12
907 48.04 humidity 60.0 90 > th dose independent rect. 23 12
920 48.05 humidity 90.0 30 < th dose independent rect. 9 14
923 48.05 radiation 1.0 270 > th dose dependent rect. 5 1
932 48.06 radiation 30.0 10 < th dose independent rect. 23 12
938 48.07 temperature 25.0 270 > th dose independent rect. 1 1
943 48.07 radiation 40.0 90 < th dose independent rect. 7 10
944 48.07 wind 9.0 10 < th dose independent rect. 15 14
947 48.07 atmosphere 1000.0 10 > th dose independent rect. 5 21
949 48.07 temperature 15.0 10 > th dose dependent rect. 5 2
966 48.08 radiation 1.0 10 > th dose independent rect. 18 21
969 48.08 wind 1.0 30 > th dose independent rect. 21 23
984 48.09 radiation 40.0 30 < th dose independent rect. 23 18
987 48.09 humidity 90.0 30 < th dose dependent rect. 17 22
989 48.10 humidity 60.0 90 > th dose independent rect. 2 15
991 48.10 wind 9.0 30 < th dose independent rect. 23 23