Os08g0411800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0411800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.98 | 0.49 | 3.14 | 0.21 | 0.064 | 0.152 | -0.821 | 1.95 | 0.161 | 3.16 | 67.02 | 57 | -- | -- |
| 115.81 | 0.505 | 3.14 | 0.318 | 0.0153 | 0.224 | 0.514 | -- | 0.197 | 1.04 | 75.8 | 49 | -- | -- |
| 110.19 | 0.489 | 3.13 | 0.241 | 0.0521 | 0.16 | -- | 1.33 | 0.174 | 2.91 | 70.72 | 57 | -- | -- |
| 115.87 | 0.501 | 3.13 | 0.269 | 0.0708 | 0.289 | -- | -- | 0.219 | 3.6 | 89.15 | 58 | -- | -- |
| 110.06 | 0.489 | 3.12 | 0.219 | -- | 0.216 | -- | 1.35 | 0.194 | -- | 82.08 | 57 | -- | -- |
| 116.92 | 0.507 | 3.14 | 0.323 | 0.205 | -- | 0.6 | -- | 0.169 | 2.54 | -- | -- | -- | -- |
| 118.11 | 0.509 | 3.14 | 0.307 | 0.214 | -- | -- | -- | 0.165 | 3.27 | -- | -- | -- | -- |
| 116.03 | 0.502 | 3.13 | 0.27 | -- | 0.341 | -- | -- | 0.235 | -- | 89 | 59 | -- | -- |
| 117.8 | 0.505 | 3.14 | -- | 0.0579 | 0.325 | -- | -- | 0.199 | 3.33 | 89.07 | 58 | -- | -- |
| 120.7 | 0.513 | 3.14 | 0.316 | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
| 120.6 | 0.514 | 3.15 | -- | 0.22 | -- | -- | -- | 0.131 | 3.27 | -- | -- | -- | -- |
| 117.92 | 0.506 | 3.13 | -- | -- | 0.364 | -- | -- | 0.209 | -- | 89 | 58 | -- | -- |
| 123.34 | 0.518 | 3.15 | -- | -- | -- | -- | -- | 0.136 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.57 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 5 | 19 |
| 4 | 107.86 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 16 | 18 |
| 6 | 108.01 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 5 | 14 |
| 9 | 108.06 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 10 | 108.07 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 20 | 14 |
| 11 | 108.12 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 19 |
| 40 | 108.35 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 14 |
| 41 | 108.36 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 48 | 108.40 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 52 | 108.41 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 13 | 22 |
| 53 | 108.43 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 72 | 108.54 | humidity | 90.0 | 720 | < th | dose dependent | sin | 9 | NA |
| 121 | 108.79 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 122 | 108.81 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 123 | 108.81 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 133 | 108.86 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 135 | 108.87 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 147 | 108.91 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 148 | 108.91 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 22 | 10 |
| 180 | 109.03 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 9 |
| 182 | 109.03 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 23 |
| 240 | 109.17 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 243 | 109.18 | humidity | 70.0 | 30 | > th | dose dependent | no | NA | NA |
| 257 | 109.21 | humidity | 60.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 288 | 109.26 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 292 | 109.27 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 304 | 109.30 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 7 |
| 306 | 109.30 | humidity | 90.0 | 10 | < th | dose dependent | sin | 9 | NA |
| 313 | 109.32 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 323 | 109.35 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 17 |
| 324 | 109.35 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 5 | 7 |
| 350 | 109.39 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 20 | 18 |
| 355 | 109.39 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 361 | 109.40 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 13 |
| 422 | 109.51 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 5 |
| 446 | 109.54 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 8 |
| 447 | 109.54 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 5 | 11 |
| 467 | 109.57 | humidity | 90.0 | 720 | < th | dose independent | rect. | 21 | 14 |
| 482 | 109.58 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 5 |
| 547 | 109.68 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 549 | 109.68 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 24 | 14 |
| 555 | 109.69 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 556 | 109.69 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 10 |
| 564 | 109.71 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 13 |
| 565 | 109.71 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 13 |
| 568 | 109.71 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 13 |
| 596 | 109.75 | humidity | 60.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 609 | 109.78 | humidity | 90.0 | 720 | < th | dose independent | rect. | 23 | 12 |
| 611 | 109.79 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 637 | 109.82 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 638 | 109.82 | humidity | 90.0 | 720 | < th | dose independent | rect. | 17 | 18 |
| 639 | 109.82 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 23 |
| 641 | 109.82 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 5 |
| 657 | 109.84 | humidity | 80.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 667 | 109.84 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 669 | 109.84 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 686 | 109.86 | humidity | 90.0 | 90 | > th | dose independent | rect. | 16 | 22 |
| 688 | 109.86 | humidity | 90.0 | 90 | > th | dose independent | rect. | 20 | 23 |
| 699 | 109.87 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 700 | 109.87 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 711 | 109.88 | humidity | 90.0 | 720 | < th | dose independent | sin | 9 | NA |
| 722 | 109.89 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 725 | 109.89 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 733 | 109.90 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 9 | 8 |
| 735 | 109.90 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 9 | 8 |
| 749 | 109.91 | humidity | 80.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 773 | 109.94 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 834 | 109.99 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 835 | 109.99 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 9 | 8 |
| 836 | 109.99 | humidity | 80.0 | 10 | > th | dose independent | rect. | 20 | 14 |
| 840 | 109.99 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 23 |
| 856 | 110.01 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 867 | 110.01 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 20 | 19 |
| 882 | 110.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 892 | 110.04 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 4 | 10 |
| 924 | 110.07 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 936 | 110.08 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 10 |
| 937 | 110.08 | humidity | 90.0 | 90 | > th | dose independent | rect. | 11 | 23 |
| 939 | 110.08 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 10 |
| 946 | 110.09 | humidity | 90.0 | 90 | > th | dose dependent | sin | 22 | NA |
| 959 | 110.11 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 16 | 13 |
| 975 | 110.12 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |