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Os08g0407600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF581 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 15.7 (0.0201) R2 : 0.632
β1 : 1.41 (0.0736) R2dD : 0.306 R2D : 0.118
β2 : 0.602 (0.0481) R2dC : 0.127 R2C : 0.0547
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.812 (0.0429) R2dN8 : 0.387 R2N8 : 0.191
σ : 0.378
deviance : 65.18
__
_____
C
peak time of C : 1.19
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.88 0.348 15.7 1.03 0.568 -0.21 1.14 3.04 0.699 1.43 0.83 1288 -- --
62.34 0.368 15.6 1.38 0.599 0.271 0.339 -- 0.88 1.41 20.01 20431 -- --
57.06 0.352 15.7 1.03 0.599 -0.2 -- 2.37 0.708 1.03 1.509 1458 -- --
61.65 0.366 15.7 1.13 0.664 -0.399 -- -- 0.704 1.41 0.009027 33564 -- --
71.1 0.393 15.7 1.32 -- 0.769 -- 2.44 0.788 -- 0.8304 1735 -- --
64.54 0.377 15.7 1.42 0.603 -- 0.402 -- 0.814 1.32 -- -- -- --
65.18 0.378 15.7 1.41 0.602 -- -- -- 0.812 1.19 -- -- -- --
64.71 0.375 15.6 1.44 -- 0.567 -- -- 0.846 -- 19.97 201 -- --
77.61 0.41 15.7 -- 0.473 -0.942 -- -- 0.619 1.12 4.322e-07 47520 -- --
87.62 0.437 15.6 1.43 -- -- -- -- 0.825 -- -- -- -- --
117.42 0.507 15.7 -- 0.626 -- -- -- 0.656 1.27 -- -- -- --
95.83 0.456 15.8 -- -- -1.11 -- -- 0.474 -- 0.01 47520 -- --
141.63 0.555 15.7 -- -- -- -- -- 0.666 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 52.21 humidity 90.0 270 < th dose independent rect. 17 6
14 54.29 radiation 1.0 720 < th dose dependent rect. 7 17
18 54.42 radiation 1.0 720 < th dose dependent sin 20 NA
28 54.56 radiation 1.0 720 < th dose dependent rect. 3 15
30 54.60 temperature 10.0 270 > th dose dependent rect. 17 6
39 54.67 radiation 1.0 720 < th dose dependent rect. 13 12
45 54.76 temperature 15.0 270 > th dose dependent rect. 19 2
53 54.84 radiation 1.0 720 < th dose independent rect. 8 17
55 54.84 temperature 15.0 270 > th dose dependent rect. 18 4
68 54.95 radiation 1.0 720 < th dose independent rect. 13 12
98 55.12 temperature 15.0 270 > th dose independent rect. 17 6
116 55.28 radiation 1.0 720 < th dose independent sin 19 NA
126 55.36 temperature 15.0 10 > th dose independent rect. 18 7
145 55.46 radiation 1.0 720 > th dose independent rect. 9 7
154 55.53 atmosphere 1005.0 270 > th dose independent rect. 17 6
158 55.57 radiation 1.0 720 < th dose independent rect. 3 15
161 55.59 temperature 15.0 270 > th dose independent rect. 19 2
176 55.65 temperature 15.0 270 > th dose independent rect. 7 15
180 55.67 temperature 10.0 10 > th dose dependent rect. 18 7
181 55.68 humidity 80.0 14400 > th dose independent rect. 20 3
182 55.68 precipitation 0.1 14400 > th dose independent rect. 4 4
190 55.72 precipitation 0.1 14400 > th dose dependent rect. 4 4
211 55.82 temperature 15.0 10 > th dose independent rect. 20 5
218 55.86 precipitation 0.1 14400 < th dose independent rect. 4 4
220 55.86 precipitation 0.1 14400 < th dose dependent rect. 4 4
226 55.89 temperature 10.0 10 > th dose dependent rect. 20 5
229 55.90 temperature 25.0 270 > th dose dependent rect. 18 14
254 56.01 temperature 25.0 270 > th dose dependent sin 11 NA
266 56.06 atmosphere 1005.0 270 > th dose independent rect. 18 3
269 56.06 humidity 90.0 90 < th dose independent rect. 18 12
280 56.12 temperature 15.0 90 > th dose independent rect. 9 15
281 56.12 wind 7.0 14400 > th dose dependent rect. 14 4
282 56.12 wind 7.0 14400 > th dose dependent rect. 13 6
285 56.14 temperature 25.0 270 > th dose independent rect. 16 18
295 56.18 temperature 25.0 270 > th dose independent rect. 16 20
299 56.18 radiation 1.0 720 < th dose dependent rect. 21 21
308 56.21 radiation 1.0 720 > th dose independent rect. 9 21
309 56.21 radiation 1.0 1440 > th dose independent rect. 11 21
310 56.21 radiation 1.0 1440 < th dose dependent rect. 11 21
317 56.23 wind 7.0 14400 > th dose dependent rect. 11 8
340 56.28 temperature 25.0 270 > th dose dependent rect. 17 16
345 56.30 humidity 70.0 720 > th dose independent rect. 15 9
351 56.31 wind 9.0 14400 > th dose independent rect. 13 7
353 56.31 radiation 1.0 1440 < th dose dependent rect. 11 8
376 56.35 radiation 1.0 270 < th dose independent rect. 22 20
378 56.35 radiation 1.0 1440 < th dose independent rect. 11 21
389 56.36 temperature 25.0 90 < th dose independent sin 10 NA
418 56.39 humidity 90.0 270 < th dose dependent rect. 19 4
426 56.40 radiation 1.0 1440 > th dose independent sin 23 NA
460 56.44 precipitation 0.1 14400 > th dose dependent rect. 5 2
474 56.46 radiation 1.0 720 < th dose independent sin 0 NA
477 56.46 wind 1.0 270 > th dose independent rect. 17 6
478 56.46 wind 7.0 14400 > th dose independent rect. 11 7
481 56.46 radiation 1.0 1440 > th dose independent rect. 6 13
495 56.46 radiation 40.0 4320 < th dose dependent rect. 19 10
506 56.47 radiation 30.0 270 < th dose independent rect. 9 14
532 56.49 wind 7.0 14400 > th dose independent rect. 11 5
541 56.50 precipitation 0.1 14400 < th dose independent rect. 5 2
542 56.50 humidity 80.0 1440 < th dose independent rect. 8 6
545 56.50 precipitation 0.1 14400 < th dose dependent rect. 5 2
588 56.55 radiation 10.0 270 < th dose independent rect. 17 6
594 56.55 radiation 1.0 1440 < th dose dependent rect. 7 12
601 56.56 wind 7.0 14400 < th dose independent rect. 11 5
615 56.57 wind 9.0 14400 < th dose independent rect. 13 6
617 56.57 wind 1.0 30 > th dose independent rect. 18 7
618 56.57 radiation 1.0 1440 < th dose independent rect. 6 13
619 56.57 wind 9.0 270 < th dose independent rect. 23 18
640 56.58 wind 7.0 14400 < th dose independent rect. 11 7
641 56.58 atmosphere 1010.0 10 < th dose independent rect. 18 7
691 56.60 atmosphere 995.0 270 > th dose independent rect. 17 6
693 56.60 humidity 50.0 14400 > th dose independent rect. 19 7
722 56.61 temperature 15.0 10 > th dose independent rect. 9 16
723 56.61 wind 1.0 270 > th dose independent rect. 23 18
728 56.61 radiation 1.0 1440 < th dose dependent no NA NA
744 56.62 temperature 25.0 90 > th dose independent rect. 18 6
754 56.62 radiation 40.0 270 < th dose dependent rect. 7 16
777 56.64 radiation 1.0 1440 > th dose independent no NA NA
780 56.64 temperature 25.0 90 > th dose independent rect. 18 9
781 56.64 radiation 1.0 1440 < th dose independent rect. 6 11
846 56.65 radiation 1.0 1440 > th dose independent rect. 17 23
848 56.65 radiation 1.0 1440 < th dose independent rect. 18 23
875 56.67 radiation 1.0 1440 < th dose dependent rect. 17 23
876 56.68 wind 7.0 43200 < th dose independent rect. 12 1
894 56.69 wind 7.0 43200 > th dose independent rect. 12 1
919 56.71 wind 7.0 14400 > th dose dependent sin 23 NA
933 56.72 atmosphere 1015.0 270 < th dose independent rect. 23 18
976 56.74 radiation 1.0 720 > th dose independent rect. 15 15
991 56.74 radiation 10.0 4320 < th dose dependent rect. 19 7