Os08g0406700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0406700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.2 | 0.405 | 9.86 | 1.16 | 0.84 | -3.19 | -0.0922 | 4.14 | -0.0764 | 12.3 | 30.97 | 643 | -- | -- |
| 87.31 | 0.435 | 9.81 | 1.85 | 0.785 | -3.26 | 0.185 | -- | -0.00973 | 12 | 28.93 | 596 | -- | -- |
| 74.05 | 0.401 | 9.85 | 1.21 | 0.803 | -3.23 | -- | 3.93 | -0.051 | 12.1 | 30.91 | 604 | -- | -- |
| 84.3 | 0.428 | 9.8 | 1.8 | 1.19 | -3.09 | -- | -- | 0.0302 | 14.8 | 26.56 | 1072 | -- | -- |
| 82.95 | 0.424 | 9.85 | 1.33 | -- | -3.45 | -- | 4.76 | 0.0381 | -- | 41.08 | 205 | -- | -- |
| 221.41 | 0.698 | 9.66 | 2.74 | 0.863 | -- | 0.267 | -- | 0.698 | 15.9 | -- | -- | -- | -- |
| 221.62 | 0.697 | 9.66 | 2.74 | 0.865 | -- | -- | -- | 0.699 | 15.9 | -- | -- | -- | -- |
| 89.97 | 0.442 | 9.8 | 1.95 | -- | -3.04 | -- | -- | 0.0474 | -- | 28.37 | 215 | -- | -- |
| 103.7 | 0.474 | 9.87 | -- | 0.825 | -3.57 | -- | -- | -0.143 | 16 | 23.08 | 7984 | -- | -- |
| 262.59 | 0.757 | 9.66 | 2.71 | -- | -- | -- | -- | 0.676 | -- | -- | -- | -- | -- |
| 420.05 | 0.959 | 9.73 | -- | 0.812 | -- | -- | -- | 0.394 | 16 | -- | -- | -- | -- |
| 142.83 | 0.557 | 9.88 | -- | -- | -4.14 | -- | -- | -0.309 | -- | 22.71 | 7691 | -- | -- |
| 456.08 | 0.997 | 9.73 | -- | -- | -- | -- | -- | 0.376 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.25 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 22 |
| 8 | 74.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 10 | 74.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 12 | 74.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 14 | 74.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 19 | 74.55 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 28 | 74.79 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 18 |
| 31 | 74.81 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 35 | 74.87 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 11 |
| 51 | 75.03 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 11 |
| 54 | 75.05 | temperature | 30 | 1440 | < th | dose dependent | sin | 6 | NA |
| 57 | 75.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 14 |
| 61 | 75.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 13 |
| 71 | 75.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 106 | 75.44 | temperature | 10 | 1440 | > th | dose dependent | sin | 7 | NA |
| 128 | 75.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 249 | 76.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 262 | 76.39 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 496 | 77.42 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 596 | 77.93 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 675 | 78.30 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 701 | 78.47 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 725 | 78.56 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 747 | 78.63 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 755 | 78.66 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 771 | 78.75 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |