Os08g0406400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sulfate transporter (Fragment).
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Os08g0406400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sulfate transporter (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.37 | 0.426 | 10.3 | 0.222 | 1.13 | 1.1 | -0.0827 | 1.68 | -0.171 | 9.77 | 70.62 | 11134 | -- | -- |
| 83.1 | 0.425 | 10.3 | 0.118 | 1.08 | 1.26 | -0.187 | -- | -0.322 | 9.5 | 70.09 | 16102 | -- | -- |
| 81.05 | 0.419 | 10.3 | 0.266 | 1.13 | 1.11 | -- | 2.08 | -0.174 | 9.78 | 69.94 | 9671 | -- | -- |
| 83.12 | 0.425 | 10.3 | 0.0861 | 1.07 | 1.22 | -- | -- | -0.305 | 9.66 | 70.01 | 15975 | -- | -- |
| 150.53 | 0.571 | 10.3 | 0.244 | -- | 1.2 | -- | 1.81 | -0.142 | -- | 68.93 | 11632 | -- | -- |
| 110.49 | 0.493 | 10.2 | -0.104 | 1.05 | -- | -0.208 | -- | -0.0414 | 9.58 | -- | -- | -- | -- |
| 110.65 | 0.493 | 10.2 | -0.112 | 1.05 | -- | -- | -- | -0.0418 | 9.57 | -- | -- | -- | -- |
| 150.96 | 0.572 | 10.3 | 0.0809 | -- | 1.15 | -- | -- | -0.263 | -- | 70.06 | 15980 | -- | -- |
| 83.3 | 0.425 | 10.3 | -- | 1.07 | 1.21 | -- | -- | -0.31 | 9.63 | 70.08 | 16014 | -- | -- |
| 176.37 | 0.621 | 10.3 | -0.12 | -- | -- | -- | -- | -0.0393 | -- | -- | -- | -- | -- |
| 110.97 | 0.493 | 10.2 | -- | 1.06 | -- | -- | -- | -0.0293 | 9.58 | -- | -- | -- | -- |
| 150.33 | 0.571 | 10.3 | -- | -- | 1.17 | -- | -- | -0.308 | -- | 71.27 | 15980 | -- | -- |
| 176.75 | 0.621 | 10.3 | -- | -- | -- | -- | -- | -0.026 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.94 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 2 | 74.88 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 7 | 75.91 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 13 | 76.22 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 16 | 76.26 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 21 | 76.60 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 45 | 77.83 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 64 | 78.32 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 81 | 78.64 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 91 | 78.76 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 92 | 78.76 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 96 | 78.81 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 102 | 78.91 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 105 | 78.97 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 107 | 78.99 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 122 | 79.20 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 123 | 79.23 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 124 | 79.23 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 133 | 79.34 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 142 | 79.45 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 182 | 79.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 186 | 79.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 190 | 79.98 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 191 | 79.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 192 | 79.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 198 | 80.07 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 213 | 80.18 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 224 | 80.25 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 11 | 5 |
| 230 | 80.29 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 244 | 80.40 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 272 | 80.59 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 297 | 80.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 333 | 80.92 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 439 | 81.30 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 464 | 81.39 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 476 | 81.43 | humidity | 50.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 499 | 81.49 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 509 | 81.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 514 | 81.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 516 | 81.54 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 554 | 81.64 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 22 | NA |
| 578 | 81.69 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 6 | 5 |
| 651 | 81.83 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 743 | 82.00 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 16 | 21 |
| 756 | 82.03 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 760 | 82.03 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 772 | 82.05 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 7 |
| 870 | 82.22 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 22 |
| 876 | 82.23 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 3 |
| 886 | 82.25 | wind | 5.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 930 | 82.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 936 | 82.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 942 | 82.34 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 22 |
| 952 | 82.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 971 | 82.38 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 15 | 18 |