Os08g0398700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase M1, membrane alanine aminopeptidase family protein.
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Os08g0398700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase M1, membrane alanine aminopeptidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.26 | 0.165 | 12.4 | 0.593 | 0.443 | 0.31 | -0.55 | -0.00502 | 0.237 | 20.7 | 66 | 803 | -- | -- |
| 12.26 | 0.163 | 12.4 | 0.593 | 0.443 | 0.309 | -0.551 | -- | 0.237 | 20.7 | 66 | 803 | -- | -- |
| 13.12 | 0.169 | 12.4 | 0.608 | 0.45 | 0.314 | -- | -0.263 | 0.232 | 20.5 | 66.97 | 856 | -- | -- |
| 13.21 | 0.169 | 12.4 | 0.617 | 0.463 | 0.294 | -- | -- | 0.234 | 20.5 | 65.16 | 867 | -- | -- |
| 18.52 | 0.2 | 12.4 | 0.566 | -- | 0.637 | -- | -0.601 | 0.201 | -- | 84.03 | 706 | -- | -- |
| 13.92 | 0.175 | 12.4 | 0.64 | 0.508 | -- | -0.447 | -- | 0.197 | 20.7 | -- | -- | -- | -- |
| 14.58 | 0.179 | 12.4 | 0.655 | 0.51 | -- | -- | -- | 0.197 | 20.7 | -- | -- | -- | -- |
| 18.82 | 0.202 | 12.4 | 0.607 | -- | 0.601 | -- | -- | 0.205 | -- | 86.76 | 708 | -- | -- |
| 22.67 | 0.222 | 12.4 | -- | 0.485 | 0.469 | -- | -- | 0.237 | 20.2 | 61 | 1141 | -- | -- |
| 29.25 | 0.253 | 12.4 | 0.654 | -- | -- | -- | -- | 0.193 | -- | -- | -- | -- | -- |
| 25.9 | 0.238 | 12.4 | -- | 0.508 | -- | -- | -- | 0.124 | 20.7 | -- | -- | -- | -- |
| 27.86 | 0.246 | 12.4 | -- | -- | 0.663 | -- | -- | 0.161 | -- | 81 | 734 | -- | -- |
| 40.54 | 0.297 | 12.4 | -- | -- | -- | -- | -- | 0.12 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.57 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 2 | 11.61 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 15 |
| 16 | 11.91 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 18 | 11.92 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 23 |
| 23 | 11.94 | temperature | 25.0 | 270 | < th | dose independent | rect. | 9 | 3 |
| 24 | 11.94 | humidity | 60.0 | 720 | > th | dose independent | rect. | 15 | 21 |
| 49 | 12.07 | humidity | 60.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 52 | 12.08 | humidity | 60.0 | 720 | > th | dose independent | rect. | 15 | 14 |
| 70 | 12.12 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 74 | 12.13 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 6 |
| 76 | 12.14 | wind | 7.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 77 | 12.14 | humidity | 50.0 | 720 | > th | dose independent | rect. | 11 | 16 |
| 78 | 12.14 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 97 | 12.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 17 |
| 101 | 12.18 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 15 | 20 |
| 104 | 12.19 | humidity | 50.0 | 720 | > th | dose independent | rect. | 24 | 23 |
| 108 | 12.20 | humidity | 60.0 | 720 | > th | dose independent | sin | 13 | NA |
| 121 | 12.21 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 20 | 9 |
| 122 | 12.21 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 130 | 12.21 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 8 | 19 |
| 133 | 12.22 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 135 | 12.22 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 136 | 12.22 | wind | 7.0 | 90 | < th | dose independent | rect. | 5 | 15 |
| 137 | 12.22 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 5 | 15 |
| 139 | 12.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 23 |
| 158 | 12.24 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 168 | 12.25 | humidity | 50.0 | 720 | > th | dose independent | rect. | 11 | 8 |
| 169 | 12.25 | humidity | 50.0 | 720 | > th | dose independent | rect. | 7 | 16 |
| 171 | 12.25 | humidity | 70.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 178 | 12.26 | humidity | 60.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 184 | 12.26 | humidity | 60.0 | 720 | < th | dose independent | rect. | 15 | 20 |
| 195 | 12.27 | humidity | 60.0 | 720 | < th | dose independent | sin | 11 | NA |
| 232 | 12.28 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 234 | 12.29 | humidity | 60.0 | 720 | > th | dose independent | rect. | 9 | 14 |
| 243 | 12.29 | humidity | 70.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 246 | 12.29 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 15 | 5 |
| 260 | 12.30 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 261 | 12.30 | temperature | 25.0 | 90 | > th | dose independent | rect. | 5 | 15 |
| 269 | 12.30 | humidity | 70.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 290 | 12.31 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 8 | 12 |
| 325 | 12.32 | humidity | 70.0 | 720 | < th | dose dependent | no | NA | NA |
| 433 | 12.33 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 475 | 12.34 | humidity | 50.0 | 720 | > th | dose independent | rect. | 1 | 17 |
| 480 | 12.34 | humidity | 60.0 | 720 | > th | dose independent | rect. | 9 | 23 |
| 526 | 12.35 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 11 |
| 615 | 12.37 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 15 |
| 651 | 12.37 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 668 | 12.38 | humidity | 50.0 | 720 | > th | dose independent | sin | 1 | NA |
| 675 | 12.38 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 677 | 12.38 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 9 |
| 680 | 12.38 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 683 | 12.38 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 685 | 12.38 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 9 |
| 694 | 12.38 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 712 | 12.38 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 720 | 12.38 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 20 | 9 |
| 742 | 12.39 | humidity | 60.0 | 720 | > th | dose independent | no | NA | NA |
| 747 | 12.39 | humidity | 60.0 | 720 | < th | dose independent | rect. | 15 | 5 |
| 755 | 12.39 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 9 |
| 757 | 12.39 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 797 | 12.39 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 5 |
| 822 | 12.40 | humidity | 60.0 | 720 | < th | dose independent | no | NA | NA |
| 823 | 12.40 | temperature | 25.0 | 10 | < th | dose independent | rect. | 10 | 4 |
| 839 | 12.40 | humidity | 60.0 | 720 | < th | dose independent | rect. | 8 | 12 |
| 941 | 12.40 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 943 | 12.40 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 17 | 3 |
| 958 | 12.40 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 8 | 19 |
| 969 | 12.41 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 10 |