Os08g0398300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os08g0398300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.11 | 0.367 | 3.11 | 0.0211 | 0.0858 | 0.329 | -0.0983 | -0.0394 | -0.00337 | 4.62 | 1010 | 10 | -- | -- |
| 62.11 | 0.37 | 3.11 | 0.0177 | 0.0859 | 0.329 | -0.0977 | -- | -0.004 | 4.63 | 1010 | 12 | -- | -- |
| 62.13 | 0.37 | 3.11 | 0.0215 | 0.085 | 0.33 | -- | -0.0374 | -0.00283 | 4.49 | 1010 | 10 | -- | -- |
| 62.14 | 0.37 | 3.11 | 0.0183 | 0.0852 | 0.33 | -- | -- | -0.00344 | 4.48 | 1010 | 12 | -- | -- |
| 62.52 | 0.37 | 3.11 | 0.0251 | -- | 0.326 | -- | -0.0422 | -0.00076 | -- | 1010 | 12 | -- | -- |
| 64.61 | 0.377 | 3.12 | 0.00514 | 0.0841 | -- | -0.12 | -- | -0.0285 | 5.4 | -- | -- | -- | -- |
| 64.64 | 0.377 | 3.12 | 0.00483 | 0.0833 | -- | -- | -- | -0.0279 | 5.37 | -- | -- | -- | -- |
| 62.52 | 0.37 | 3.11 | 0.0214 | -- | 0.327 | -- | -- | -0.00144 | -- | 1010 | 15 | -- | -- |
| 62.15 | 0.369 | 3.11 | -- | 0.0855 | 0.329 | -- | -- | -0.00553 | 4.48 | 1010 | 14 | -- | -- |
| 65 | 0.377 | 3.12 | 0.00766 | -- | -- | -- | -- | -0.0259 | -- | -- | -- | -- | -- |
| 64.64 | 0.376 | 3.12 | -- | 0.0834 | -- | -- | -- | -0.0285 | 5.37 | -- | -- | -- | -- |
| 62.54 | 0.37 | 3.11 | -- | -- | 0.326 | -- | -- | -0.00389 | -- | 1010 | 15 | -- | -- |
| 65.01 | 0.376 | 3.12 | -- | -- | -- | -- | -- | -0.0267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.92 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 58.00 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 3 | 58.01 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 4 | 58.01 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 9 | 58.07 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 12 | 58.12 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 17 | 58.19 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 19 | 58.20 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 21 | 58.20 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 22 | 58.20 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 27 | 58.20 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 29 | 58.20 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 34 | 58.20 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 35 | 58.20 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 36 | 58.20 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 39 | 58.20 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 44 | 58.20 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 49 | 58.54 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 51 | 58.67 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 57 | 58.86 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 63 | 58.98 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 79 | 59.31 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 80 | 59.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 83 | 59.31 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 87 | 59.31 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 96 | 59.31 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 97 | 59.31 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 117 | 59.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 164 | 59.97 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 165 | 60.17 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 166 | 60.26 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 168 | 60.32 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 169 | 60.33 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 6 |
| 174 | 60.42 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 177 | 60.44 | radiation | 40.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 195 | 60.44 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 196 | 60.44 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 289 | 60.60 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 10 |
| 307 | 60.64 | radiation | 20.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 373 | 60.72 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 384 | 60.72 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 395 | 60.75 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 415 | 60.80 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 417 | 60.80 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 419 | 60.83 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 1 |
| 420 | 60.83 | atmosphere | 1010.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 421 | 60.83 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 1 |
| 442 | 60.85 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 475 | 60.89 | humidity | 60.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 506 | 60.93 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 586 | 61.00 | atmosphere | 1010.0 | 30 | > th | dose dependent | sin | 22 | NA |
| 617 | 61.07 | atmosphere | 1010.0 | 30 | > th | dose dependent | rect. | 24 | 13 |
| 628 | 61.08 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 630 | 61.08 | wind | 1.0 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 758 | 61.11 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 873 | 61.13 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 915 | 61.22 | humidity | 60.0 | 10 | < th | dose independent | sin | 15 | NA |
| 931 | 61.25 | humidity | 60.0 | 90 | < th | dose independent | rect. | 11 | 5 |