Os08g0398000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os08g0398000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.8 | 0.375 | 7.61 | 1.07 | 0.481 | 2.98 | -0.0665 | -0.0522 | 0.482 | 18 | 30.05 | 40 | -- | -- |
| 63.74 | 0.372 | 7.61 | 1.06 | 0.492 | 2.99 | -0.058 | -- | 0.478 | 18.1 | 30.05 | 44 | -- | -- |
| 63.71 | 0.372 | 7.61 | 1.07 | 0.491 | 2.99 | -- | -0.0582 | 0.476 | 18.2 | 30.15 | 46 | -- | -- |
| 63.62 | 0.371 | 7.61 | 1.07 | 0.494 | 2.98 | -- | -- | 0.482 | 18.2 | 29.95 | 52 | -- | -- |
| 72.69 | 0.399 | 7.61 | 0.989 | -- | 2.71 | -- | -0.116 | 0.421 | -- | 30.15 | 46 | -- | -- |
| 181.21 | 0.631 | 7.74 | 0.363 | 0.802 | -- | 0.454 | -- | -0.0925 | 0.644 | -- | -- | -- | -- |
| 182.08 | 0.632 | 7.74 | 0.346 | 0.801 | -- | -- | -- | -0.0946 | 0.596 | -- | -- | -- | -- |
| 72.64 | 0.399 | 7.61 | 0.972 | -- | 2.7 | -- | -- | 0.422 | -- | 29.95 | 52 | -- | -- |
| 90.3 | 0.445 | 7.65 | -- | 0.334 | 2.53 | -- | -- | 0.28 | 19 | 30.24 | 50 | -- | -- |
| 222.25 | 0.697 | 7.72 | 0.374 | -- | -- | -- | -- | -0.0808 | -- | -- | -- | -- | -- |
| 185.23 | 0.637 | 7.75 | -- | 0.806 | -- | -- | -- | -0.133 | 0.617 | -- | -- | -- | -- |
| 96.05 | 0.458 | 7.65 | -- | -- | 2.46 | -- | -- | 0.264 | -- | 30.24 | 50 | -- | -- |
| 225.94 | 0.702 | 7.73 | -- | -- | -- | -- | -- | -0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 3 | 63.67 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 5 | 63.95 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 7 | 64.13 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 9 | 64.56 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 12 | 65.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 13 | 65.21 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 19 | 66.32 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 22 | 66.91 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 23 | 66.92 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 30 | 67.53 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 32 | 67.72 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 43 | 70.84 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 45 | 70.95 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 51 | 71.68 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 60 | 73.07 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 66 | 73.90 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 72 | 74.29 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 122 | 77.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 18 |
| 130 | 77.34 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 131 | 77.35 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 147 | 77.65 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 153 | 77.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 16 |
| 178 | 77.90 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 188 | 78.01 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 189 | 78.02 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 195 | 78.05 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 201 | 78.08 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 203 | 78.09 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 244 | 78.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 10 |
| 443 | 80.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 453 | 80.09 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 17 |
| 466 | 80.27 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 17 |
| 496 | 80.49 | temperature | 20 | 1440 | > th | dose dependent | sin | 2 | NA |
| 777 | 81.39 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 8 |
| 781 | 81.40 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 881 | 81.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 18 |
| 915 | 81.73 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 970 | 81.85 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 7 |