Os08g0392700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0392700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.19 | 0.493 | 7.99 | 0.682 | 1.15 | -2.25 | 0.261 | 2.71 | 0.172 | 0.229 | 29.64 | 90 | 23.5 | -- |
| 122.75 | 0.516 | 7.96 | 0.924 | 1.09 | -2.31 | 0.23 | -- | 0.23 | 0.107 | 28.9 | 113 | 23.3 | -- |
| 110.36 | 0.489 | 7.99 | 0.669 | 1.19 | -2.21 | -- | 2.78 | 0.172 | 0.0585 | 29.3 | 90 | 23.6 | -- |
| 121.21 | 0.513 | 7.97 | 0.902 | 1.02 | -2.14 | -- | -- | 0.229 | 22.6 | 26.64 | 226 | 23.6 | -- |
| 130.17 | 0.531 | 7.95 | 0.804 | -- | -2.52 | -- | 1.9 | 0.264 | -- | 33.69 | 303 | 23.3 | -- |
| 166.48 | 0.605 | 7.91 | 1.26 | 1.56 | -- | -1.18 | -- | 0.555 | 20.9 | -- | -- | -- | -- |
| 171.08 | 0.613 | 7.91 | 1.29 | 1.56 | -- | -- | -- | 0.554 | 21.1 | -- | -- | -- | -- |
| 134.83 | 0.541 | 7.92 | 0.997 | -- | -2.7 | -- | -- | 0.365 | -- | 35.84 | 157 | 21.6 | -- |
| 141.21 | 0.553 | 8 | -- | 0.956 | -2.49 | -- | -- | 0.0813 | 23.1 | 26.68 | 224 | 23.6 | -- |
| 312.05 | 0.825 | 7.87 | 1.3 | -- | -- | -- | -- | 0.545 | -- | -- | -- | -- | -- |
| 215.26 | 0.686 | 7.95 | -- | 1.56 | -- | -- | -- | 0.41 | 21.1 | -- | -- | -- | -- |
| 158.32 | 0.586 | 7.97 | -- | -- | -2.92 | -- | -- | 0.126 | -- | 30.85 | 370 | 23.7 | -- |
| 356.51 | 0.881 | 7.9 | -- | -- | -- | -- | -- | 0.401 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.84 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 12 |
| 2 | 110.71 | temperature | 30 | 90 | < th | dose dependent | sin | 5 | NA |
| 9 | 112.04 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 14 |
| 38 | 115.71 | temperature | 15 | 270 | > th | dose dependent | sin | 7 | NA |
| 56 | 117.06 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 12 |
| 127 | 121.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 8 |
| 142 | 121.77 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 12 |
| 182 | 123.22 | temperature | 20 | 270 | < th | dose independent | sin | 7 | NA |
| 196 | 123.62 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 5 |
| 238 | 124.86 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 3 |
| 268 | 125.77 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 13 |
| 294 | 126.08 | temperature | 20 | 270 | > th | dose independent | sin | 6 | NA |
| 304 | 126.25 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 334 | 126.67 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 5 |
| 336 | 126.68 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 12 |
| 346 | 126.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 14 |
| 368 | 127.17 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 6 |
| 379 | 127.33 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 4 |
| 680 | 130.49 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 815 | 131.37 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 10 |
| 823 | 131.42 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 873 | 131.70 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 932 | 132.08 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 3 |
| 949 | 132.24 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 12 |