Os08g0392200 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0392200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	3.32	(0.047)	R²	:	0.093
β₁	:	-0.442	(0.172)	R²_dD	:	0.014	R²_D	:	0.00689
β₂	:	--	(--)	R²_dC	:	--	R²_C	:	--
β₃	:	2.1	(0.389)	R²_dE	:	0.11	R²_E	:	-0.00793
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	-6.33	(1.31)	R²_dD*E	:	0.084	R²_D*E	:	-0.0238
γ₁	:	-0.0395	(0.1)	R²_dN8	:	0.000419	R²_N8	:	-0.000307
σ	:	0.879
deviance	:	352.35
__

_____

C
peak time of C	:	--
E
wheather	:	wind
threshold	:	0.6872
memory length	:	2
response mode	:	< th
dose dependency	:	dose dependent
G
type of G	:	no
peak or start time of G	:	--
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
350.19	0.879	3.32	-0.47	0.195	2.47	0.353	-7.01	-0.0315	11.9	0.6635	2	--	--
369.74	0.902	3.3	-0.47	0.208	1.2	0.755	--	-0.0538	11.6	0.7068	10	--	--
350.53	0.879	3.32	-0.437	0.178	2.15	--	-6.31	-0.0357	12.4	0.6659	2	--	--
372.17	0.904	3.3	-0.436	0.202	1.14	--	--	-0.0524	11.6	0.7068	10	--	--
352.35	0.879	3.32	-0.442	--	2.1	--	-6.33	-0.0395	--	0.6872	2	--	--
382.92	0.917	3.3	-0.398	0.168	--	0.552	--	-0.0839	10.3	--	--	--	--
384.13	0.918	3.3	-0.377	0.167	--	--	--	-0.083	9.86	--	--	--	--
374.45	0.905	3.3	-0.439	--	1.07	--	--	-0.0536	--	0.8	2	--	--
377.13	0.909	3.28	--	0.204	1.07	--	--	-0.00592	11.6	0.7068	10	--	--
385.8	0.918	3.31	-0.379	--	--	--	--	-0.083	--	--	--	--	--
387.88	0.921	3.29	--	0.168	--	--	--	-0.041	10	--	--	--	--
379.49	0.91	3.29	--	--	1.01	--	--	-0.0071	--	0.8	2	--	--
389.59	0.921	3.3	--	--	--	--	--	-0.0409	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	354.10	wind	5.0	720	> th	dose independent	rect.	2	4
3	354.84	wind	5.0	720	> th	dose dependent	rect.	2	4
9	357.67	wind	5.0	1440	< th	dose independent	rect.	2	4
11	357.96	temperature	20.0	90	< th	dose independent	rect.	4	1
50	360.98	radiation	1.0	720	> th	dose independent	rect.	18	11
55	361.23	radiation	1.0	90	> th	dose independent	rect.	4	1
67	361.23	radiation	1.0	90	> th	dose dependent	rect.	4	1
79	361.48	precipitation	0.1	1440	> th	dose independent	rect.	17	1
81	361.57	temperature	25.0	90	< th	dose dependent	rect.	3	3
83	361.63	radiation	30.0	90	> th	dose independent	rect.	12	1
86	361.83	wind	1.0	30	< th	dose dependent	rect.	6	1
92	362.25	temperature	20.0	90	< th	dose independent	rect.	3	3
104	363.04	radiation	1.0	720	> th	dose independent	rect.	18	1
114	363.11	wind	3.0	1440	> th	dose independent	rect.	4	1
120	363.53	wind	5.0	720	< th	dose independent	rect.	24	9
121	363.54	precipitation	0.1	1440	< th	dose independent	rect.	17	1
122	363.54	precipitation	0.1	1440	< th	dose dependent	rect.	17	1
125	363.63	temperature	25.0	30	< th	dose dependent	rect.	6	1
130	363.75	temperature	25.0	10	< th	dose dependent	rect.	4	3
131	363.76	wind	7.0	90	< th	dose independent	rect.	13	23
141	364.05	humidity	90.0	1440	> th	dose independent	rect.	15	3
144	364.19	humidity	90.0	1440	> th	dose dependent	rect.	14	4
173	364.87	temperature	20.0	30	< th	dose dependent	rect.	4	17
184	365.01	wind	7.0	14400	> th	dose independent	rect.	6	4
189	365.08	temperature	20.0	10	< th	dose independent	rect.	4	2
192	365.13	wind	5.0	14400	> th	dose dependent	rect.	9	1
196	365.16	wind	7.0	14400	> th	dose independent	rect.	8	2
197	365.21	wind	7.0	14400	< th	dose independent	rect.	8	2
198	365.21	wind	7.0	14400	< th	dose independent	rect.	6	4
201	365.26	temperature	20.0	90	< th	dose independent	rect.	3	16
225	365.59	temperature	20.0	90	> th	dose independent	rect.	1	11
243	365.73	temperature	20.0	90	< th	dose independent	rect.	3	14
249	365.82	radiation	10.0	90	> th	dose dependent	rect.	12	1
251	365.86	humidity	80.0	30	< th	dose independent	rect.	12	2
257	365.90	temperature	20.0	30	< th	dose dependent	rect.	4	8
259	365.96	wind	7.0	1440	< th	dose dependent	rect.	1	5
277	366.06	temperature	20.0	30	< th	dose dependent	sin	0	NA
279	366.06	wind	7.0	1440	< th	dose dependent	rect.	24	7
282	366.08	radiation	10.0	1440	< th	dose independent	rect.	14	1
283	366.09	temperature	20.0	90	< th	dose independent	rect.	3	9
295	366.18	humidity	90.0	1440	< th	dose independent	rect.	15	3
305	366.27	wind	5.0	14400	> th	dose dependent	rect.	6	5
306	366.30	humidity	90.0	1440	< th	dose independent	rect.	16	1
322	366.40	wind	7.0	10	< th	dose independent	rect.	14	22
339	366.53	wind	7.0	10	> th	dose independent	rect.	11	3
357	366.63	wind	5.0	90	> th	dose dependent	rect.	10	4
404	366.91	precipitation	0.1	1440	> th	dose dependent	rect.	17	1
427	367.02	wind	1.0	10	< th	dose dependent	rect.	4	22
444	367.17	humidity	80.0	1440	> th	dose dependent	rect.	14	8
510	367.46	wind	1.0	10	< th	dose dependent	rect.	13	10
519	367.50	humidity	90.0	30	< th	dose dependent	rect.	12	2
533	367.57	temperature	20.0	90	< th	dose independent	sin	2	NA
549	367.64	wind	7.0	14400	< th	dose independent	rect.	20	16
550	367.65	radiation	10.0	1440	< th	dose dependent	rect.	14	5
557	367.65	radiation	10.0	1440	< th	dose dependent	rect.	14	15
570	367.69	temperature	10.0	30	> th	dose dependent	rect.	14	22
587	367.80	wind	5.0	90	> th	dose independent	rect.	11	3
595	367.85	humidity	90.0	1440	< th	dose independent	rect.	15	7
617	367.95	temperature	20.0	10	> th	dose independent	rect.	2	10
618	367.95	humidity	90.0	1440	< th	dose independent	rect.	14	10
639	368.02	humidity	90.0	1440	> th	dose independent	rect.	14	8
667	368.10	wind	9.0	4320	< th	dose independent	rect.	22	12
685	368.17	wind	5.0	14400	> th	dose independent	rect.	22	17
705	368.26	wind	7.0	14400	> th	dose independent	rect.	20	16
706	368.26	radiation	30.0	30	> th	dose independent	rect.	12	21
730	368.32	wind	5.0	14400	< th	dose independent	rect.	22	17
736	368.35	temperature	20.0	90	> th	dose independent	sin	2	NA
737	368.35	humidity	90.0	1440	> th	dose independent	rect.	14	10
741	368.35	temperature	20.0	90	> th	dose independent	rect.	14	22
751	368.38	wind	7.0	1440	< th	dose dependent	rect.	4	1
764	368.42	precipitation	0.1	10	< th	dose independent	rect.	14	22
767	368.42	precipitation	0.1	10	< th	dose dependent	rect.	14	22
775	368.44	wind	5.0	720	< th	dose independent	rect.	22	14
785	368.46	radiation	10.0	1440	< th	dose dependent	rect.	14	1
793	368.50	wind	7.0	90	> th	dose independent	rect.	7	7
803	368.52	temperature	20.0	270	> th	dose dependent	rect.	1	8
804	368.53	wind	5.0	14400	> th	dose independent	sin	5	NA
819	368.57	humidity	90.0	1440	< th	dose independent	rect.	21	1
830	368.60	precipitation	0.1	1440	< th	dose independent	rect.	15	1
832	368.60	precipitation	0.1	1440	< th	dose dependent	rect.	15	1
852	368.64	wind	1.0	10	< th	dose independent	rect.	6	1
865	368.67	wind	5.0	14400	< th	dose independent	sin	5	NA
867	368.67	temperature	25.0	270	< th	dose dependent	rect.	2	1
878	368.70	precipitation	0.1	1440	> th	dose independent	rect.	15	1
880	368.70	precipitation	0.1	1440	> th	dose dependent	rect.	15	1
884	368.71	wind	5.0	14400	> th	dose dependent	rect.	20	17
885	368.72	wind	1.0	10	< th	dose dependent	sin	18	NA
908	368.77	humidity	90.0	1440	> th	dose independent	rect.	21	1
919	368.79	wind	5.0	270	> th	dose dependent	rect.	10	1
924	368.81	temperature	20.0	10	< th	dose independent	rect.	4	16
948	368.87	radiation	10.0	1440	< th	dose dependent	rect.	16	1
949	368.87	wind	1.0	10	< th	dose dependent	rect.	4	5
996	368.97	wind	9.0	4320	> th	dose independent	rect.	22	12
999	368.98	atmosphere	1010.0	30	< th	dose independent	rect.	14	22