Os08g0392100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 2OG-Fe(II) oxygenase domain containing protein.
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Os08g0392100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 2OG-Fe(II) oxygenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 226.53 | 0.707 | 7.78 | 1.62 | 3.38 | 2.21 | 1.23 | 0.121 | 0.244 | 7.94 | 26.39 | 3873 | -- | -- |
| 226.53 | 0.701 | 7.78 | 1.64 | 3.38 | 2.19 | 1.23 | -- | 0.246 | 7.94 | 26.51 | 3872 | -- | -- |
| 230.93 | 0.708 | 7.79 | 1.64 | 3.38 | 2.24 | -- | 0.211 | 0.241 | 7.92 | 26.4 | 3880 | -- | -- |
| 230.97 | 0.708 | 7.78 | 1.68 | 3.38 | 2.21 | -- | -- | 0.247 | 7.92 | 26.5 | 3877 | -- | -- |
| 608.39 | 1.15 | 7.83 | 1.76 | -- | 4.73 | -- | 0.134 | 0.451 | -- | 33.2 | 585 | -- | -- |
| 307.7 | 0.822 | 7.9 | 0.59 | 3.43 | -- | 1.33 | -- | -0.306 | 8.11 | -- | -- | -- | -- |
| 313.02 | 0.829 | 7.9 | 0.627 | 3.43 | -- | -- | -- | -0.307 | 8.09 | -- | -- | -- | -- |
| 608.38 | 1.15 | 7.83 | 1.76 | -- | 4.72 | -- | -- | 0.451 | -- | 33.27 | 585 | -- | -- |
| 280.58 | 0.78 | 7.86 | -- | 3.38 | 1.37 | -- | -- | -0.0928 | 7.9 | 28.66 | 2428 | -- | -- |
| 958.59 | 1.45 | 7.99 | 0.657 | -- | -- | -- | -- | -0.265 | -- | -- | -- | -- | -- |
| 323.38 | 0.841 | 7.92 | -- | 3.43 | -- | -- | -- | -0.377 | 8.08 | -- | -- | -- | -- |
| 684.21 | 1.22 | 7.9 | -- | -- | 4.12 | -- | -- | 0.16 | -- | 55.8 | 571 | -- | -- |
| 969.98 | 1.45 | 8.01 | -- | -- | -- | -- | -- | -0.338 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 220.36 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 2 | 220.54 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 27 | 223.01 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 98 | 224.65 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 102 | 224.72 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 158 | 225.52 | temperature | 25.0 | 4320 | < th | dose dependent | sin | 14 | NA |
| 226 | 226.02 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 12 |
| 242 | 226.12 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 255 | 226.16 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 279 | 226.27 | temperature | 15.0 | 4320 | > th | dose dependent | sin | 12 | NA |
| 290 | 226.34 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 16 | 12 |
| 291 | 226.35 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 343 | 226.56 | temperature | 20.0 | 4320 | < th | dose independent | sin | 14 | NA |
| 349 | 226.58 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 355 | 226.59 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 393 | 226.75 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 418 | 226.84 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 420 | 226.84 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 427 | 226.87 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 7 |
| 447 | 226.93 | temperature | 20.0 | 4320 | > th | dose independent | sin | 14 | NA |
| 465 | 227.01 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 19 | 19 |
| 486 | 227.06 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 529 | 227.16 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 565 | 227.23 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 7 |
| 619 | 227.32 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 2 | 7 |
| 689 | 227.46 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 792 | 227.61 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 5 | 23 |
| 813 | 227.65 | temperature | 25.0 | 4320 | < th | dose dependent | no | NA | NA |
| 856 | 227.72 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 18 | 17 |
| 939 | 227.85 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 13 |