Os08g0390100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF810 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0390100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF810 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.6 | 0.467 | 5.58 | 1.47 | 0.446 | -0.0539 | 0.313 | 4.63 | 0.244 | 20.1 | 18.3 | 3840 | -- | -- |
| 108.73 | 0.486 | 5.76 | 0.114 | 0.468 | 0.348 | 0.266 | -- | -0.0552 | 19.7 | 33.64 | 6961 | -- | -- |
| 98.8 | 0.463 | 5.58 | 1.48 | 0.451 | -0.0528 | -- | 4.7 | 0.249 | 19.8 | 18.32 | 3783 | -- | -- |
| 108.64 | 0.485 | 5.77 | 0.106 | 0.496 | 0.388 | -- | -- | -0.112 | 19.6 | 33.18 | 7000 | -- | -- |
| 109.73 | 0.488 | 5.57 | 1.46 | -- | -0.00821 | -- | 4.75 | 0.237 | -- | 18.31 | 3779 | -- | -- |
| 117.55 | 0.508 | 5.76 | 0.238 | 0.436 | -- | 0.596 | -- | -0.103 | 20.6 | -- | -- | -- | -- |
| 118.35 | 0.509 | 5.76 | 0.223 | 0.449 | -- | -- | -- | -0.101 | 19.9 | -- | -- | -- | -- |
| 119.54 | 0.509 | 5.79 | 0.0887 | -- | 0.35 | -- | -- | -0.233 | -- | 33.4 | 7748 | -- | -- |
| 108.93 | 0.486 | 5.77 | -- | 0.495 | 0.404 | -- | -- | -0.126 | 19.6 | 33.16 | 7000 | -- | -- |
| 129.31 | 0.531 | 5.75 | 0.218 | -- | -- | -- | -- | -0.106 | -- | -- | -- | -- | -- |
| 119.66 | 0.512 | 5.77 | -- | 0.447 | -- | -- | -- | -0.125 | 19.9 | -- | -- | -- | -- |
| 119.66 | 0.509 | 5.79 | -- | -- | 0.409 | -- | -- | -0.275 | -- | 33.28 | 7749 | -- | -- |
| 130.56 | 0.533 | 5.76 | -- | -- | -- | -- | -- | -0.131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.95 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 2 | 95.19 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 17 | 95.40 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 48 | 98.24 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 62 | 98.42 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 4 |
| 64 | 98.47 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 65 | 98.48 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 2 |
| 84 | 98.52 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 86 | 98.55 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 23 | 9 |
| 97 | 98.69 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 188 | 99.26 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 19 | 2 |
| 193 | 99.27 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 20 | NA |
| 256 | 99.51 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 342 | 99.78 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 469 | 100.03 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 21 | 7 |
| 517 | 100.13 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 16 | 17 |
| 575 | 100.26 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 10 |
| 626 | 100.32 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 19 | 9 |
| 650 | 100.36 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 16 | 17 |
| 668 | 100.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 681 | 100.42 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 15 | 15 |
| 705 | 100.45 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 12 | 18 |
| 714 | 100.46 | temperature | 20.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 751 | 100.50 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 16 | 12 |
| 752 | 100.50 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 15 | 15 |
| 783 | 100.54 | temperature | 20.0 | 1440 | < th | dose independent | sin | 13 | NA |
| 787 | 100.54 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 12 | 19 |
| 811 | 100.57 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 816 | 100.57 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 9 | 13 |
| 829 | 100.59 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 858 | 100.61 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 893 | 100.66 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 940 | 100.70 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 972 | 100.73 | wind | 7.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 1000 | 100.76 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 22 | 16 |