Os08g0387400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cellulase (Fragment).
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Os08g0387400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cellulase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.75 | 0.59 | 4.88 | 2.19 | 1.2 | -2.07 | 0.578 | -1.56 | -0.123 | 3.65 | 12.4 | 4455 | -- | -- |
| 159.07 | 0.587 | 4.81 | 2.49 | 1.17 | -1.88 | 0.199 | -- | 0.0113 | 3.63 | 17.93 | 4522 | -- | -- |
| 158.75 | 0.587 | 4.88 | 2.19 | 1.2 | -2.07 | -- | -1.52 | -0.121 | 3.69 | 12.7 | 4475 | -- | -- |
| 159.13 | 0.588 | 4.83 | 2.43 | 1.21 | -1.75 | -- | -- | -0.0547 | 3.66 | 18.91 | 4427 | -- | -- |
| 198.96 | 0.661 | 4.86 | 1.93 | -- | -2.62 | -- | -1.45 | -0.0919 | -- | 14.6 | 4752 | -- | -- |
| 231.66 | 0.714 | 4.91 | 1.61 | 1.13 | -- | 0.546 | -- | -0.419 | 3.73 | -- | -- | -- | -- |
| 232.55 | 0.714 | 4.91 | 1.6 | 1.14 | -- | -- | -- | -0.423 | 3.75 | -- | -- | -- | -- |
| 196.99 | 0.657 | 4.83 | 2.08 | -- | -2.2 | -- | -- | -0.0396 | -- | 19.07 | 4724 | -- | -- |
| 266.59 | 0.76 | 4.97 | -- | 1.22 | -0.929 | -- | -- | -0.681 | 3.57 | 27.9 | 4474 | -- | -- |
| 303.8 | 0.814 | 4.91 | 1.65 | -- | -- | -- | -- | -0.392 | -- | -- | -- | -- | -- |
| 299.96 | 0.81 | 4.95 | -- | 1.17 | -- | -- | -- | -0.601 | 3.74 | -- | -- | -- | -- |
| 299.01 | 0.808 | 4.93 | -- | -- | -1.76 | -- | -- | -0.48 | -- | 25.04 | 1857 | -- | -- |
| 375.3 | 0.904 | 4.95 | -- | -- | -- | -- | -- | -0.575 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.30 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 2 | 155.35 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 48 | 156.71 | temperature | 20 | 4320 | > th | dose dependent | rect. | 22 | 16 |
| 50 | 156.73 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 14 |
| 52 | 156.75 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 12 |
| 80 | 156.85 | temperature | 20 | 4320 | > th | dose dependent | sin | 6 | NA |
| 438 | 157.95 | temperature | 15 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 439 | 157.96 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 443 | 157.96 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 23 |
| 515 | 158.09 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 17 |
| 529 | 158.12 | temperature | 30 | 4320 | < th | dose dependent | sin | 6 | NA |
| 539 | 158.12 | temperature | 10 | 4320 | > th | dose dependent | rect. | 8 | 23 |
| 1000 | 159.17 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 23 |