Os08g0386800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os08g0386800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.67 | 0.369 | 9.94 | 0.636 | 2.66 | -0.339 | -0.509 | 1.65 | 0.123 | 6.78 | 20.7 | 486 | -- | -- |
| 67.32 | 0.382 | 9.99 | 0.396 | 2.6 | -0.595 | -0.926 | -- | 0.0628 | 6.67 | 19.3 | 554 | -- | -- |
| 62.22 | 0.367 | 9.93 | 0.659 | 2.67 | -0.321 | -- | 1.81 | 0.13 | 6.79 | 20.76 | 469 | -- | -- |
| 68.97 | 0.387 | 9.97 | 0.419 | 2.64 | -0.88 | -- | -- | 0.0484 | 6.77 | 18.7 | 475 | -- | -- |
| 309.3 | 0.819 | 9.86 | 1.88 | -- | -1.6 | -- | 5.09 | 0.799 | -- | 25.71 | 369 | -- | -- |
| 76.7 | 0.411 | 10 | 0.132 | 2.71 | -- | -1.16 | -- | -0.0642 | 6.79 | -- | -- | -- | -- |
| 80.15 | 0.419 | 10 | 0.113 | 2.71 | -- | -- | -- | -0.0609 | 6.8 | -- | -- | -- | -- |
| 306.91 | 0.816 | 10 | 0.5 | -- | -1.51 | -- | -- | 0.391 | -- | 26.07 | 402 | -- | -- |
| 72.1 | 0.395 | 9.99 | -- | 2.66 | -0.662 | -- | -- | 0.00268 | 6.75 | 19 | 512 | -- | -- |
| 464.14 | 1.01 | 10.1 | 0.173 | -- | -- | -- | -- | -0.00839 | -- | -- | -- | -- | -- |
| 80.49 | 0.42 | 10 | -- | 2.71 | -- | -- | -- | -0.0735 | 6.8 | -- | -- | -- | -- |
| 312.48 | 0.823 | 9.97 | -- | -- | -1.51 | -- | -- | 0.396 | -- | 25.85 | 387 | -- | -- |
| 464.93 | 1.01 | 10.1 | -- | -- | -- | -- | -- | -0.0276 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.45 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 9 |
| 2 | 55.99 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 17 |
| 4 | 56.54 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 17 |
| 5 | 56.65 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 14 | 57.15 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 19 | 57.41 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 28 | 57.69 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 9 |
| 36 | 57.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 11 |
| 66 | 58.79 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 16 |
| 112 | 59.73 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 122 | 59.85 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 156 | 60.26 | temperature | 15.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 159 | 60.28 | temperature | 30.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 162 | 60.31 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 18 |
| 164 | 60.31 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 168 | 60.35 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 21 | 6 |
| 170 | 60.35 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 172 | 60.38 | wind | 9.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 183 | 60.49 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 184 | 60.50 | wind | 7.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 185 | 60.51 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 186 | 60.51 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 187 | 60.51 | humidity | 50.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 190 | 60.51 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 191 | 60.51 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 196 | 60.51 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 197 | 60.51 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 198 | 60.51 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 207 | 60.55 | wind | 7.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 208 | 60.55 | wind | 9.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 220 | 60.67 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 3 |
| 224 | 60.70 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 17 |
| 229 | 60.73 | wind | 7.0 | 43200 | > th | dose independent | rect. | 7 | 5 |
| 230 | 60.73 | wind | 7.0 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 232 | 60.74 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 7 |
| 238 | 60.79 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 3 |
| 243 | 60.80 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 21 |
| 245 | 60.81 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 250 | 60.83 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 3 |
| 253 | 60.83 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 3 |
| 261 | 60.88 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 267 | 60.90 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 275 | 60.95 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 277 | 60.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 10 |
| 278 | 60.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 286 | 61.00 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 289 | 61.02 | wind | 7.0 | 43200 | > th | dose independent | rect. | 24 | 13 |
| 295 | 61.04 | wind | 7.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 308 | 61.08 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 314 | 61.09 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 317 | 61.10 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 3 |
| 318 | 61.10 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 3 |
| 319 | 61.10 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 3 |
| 322 | 61.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 3 |
| 323 | 61.10 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 3 |
| 330 | 61.10 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 21 |
| 331 | 61.10 | temperature | 30.0 | 90 | < th | dose dependent | sin | 5 | NA |
| 332 | 61.10 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 3 |
| 343 | 61.14 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 351 | 61.17 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 3 |
| 364 | 61.22 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 371 | 61.25 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 373 | 61.25 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 379 | 61.27 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 5 |
| 385 | 61.31 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 392 | 61.33 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 24 | 14 |
| 395 | 61.35 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 438 | 61.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 21 |
| 442 | 61.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 443 | 61.45 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 449 | 61.47 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 469 | 61.52 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 475 | 61.53 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 19 |
| 476 | 61.54 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 21 | 3 |
| 489 | 61.55 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 538 | 61.66 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 548 | 61.68 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 563 | 61.73 | wind | 7.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 571 | 61.74 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 574 | 61.74 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 21 |
| 606 | 61.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 19 |
| 607 | 61.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 19 |
| 613 | 61.80 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 1 | 9 |
| 616 | 61.82 | wind | 7.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 657 | 61.91 | wind | 5.0 | 43200 | > th | dose dependent | sin | 6 | NA |
| 658 | 61.91 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 660 | 61.92 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 665 | 61.93 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 666 | 61.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 19 |
| 670 | 61.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 705 | 61.99 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 743 | 62.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 14 |
| 747 | 62.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 767 | 62.08 | wind | 9.0 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 797 | 62.13 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 811 | 62.15 | wind | 9.0 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 821 | 62.17 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 3 |
| 925 | 62.31 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 938 | 62.32 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 21 |
| 943 | 62.33 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 947 | 62.33 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 973 | 62.37 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 988 | 62.38 | wind | 9.0 | 270 | < th | dose dependent | rect. | 21 | 3 |