Os08g0379300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : PDZ/DHR/GLGF domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0379300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : PDZ/DHR/GLGF domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 270.9 | 0.773 | 6.22 | 3.34 | 1.34 | -3.12 | -2 | 2.01 | 0.514 | 14.7 | 20.5 | 1462 | -- | -- |
| 275.12 | 0.773 | 6.3 | 3.07 | 1.3 | -3.19 | -1.71 | -- | 0.352 | 14.8 | 20.28 | 2998 | -- | -- |
| 283.8 | 0.785 | 6.22 | 3.38 | 1.41 | -3.1 | -- | 2.33 | 0.529 | 15 | 20.72 | 1509 | -- | -- |
| 285.44 | 0.787 | 6.32 | 2.85 | 1.37 | -3.16 | -- | -- | 0.299 | 15.2 | 20.83 | 3160 | -- | -- |
| 361.82 | 0.886 | 6.24 | 3.49 | -- | -3.39 | -- | 2.31 | 0.5 | -- | 20.9 | 2640 | -- | -- |
| 567.7 | 1.12 | 6.46 | 1.6 | 1.52 | -- | -1.84 | -- | -0.374 | 14.7 | -- | -- | -- | -- |
| 579.06 | 1.13 | 6.47 | 1.56 | 1.53 | -- | -- | -- | -0.384 | 14.9 | -- | -- | -- | -- |
| 367.55 | 0.893 | 6.3 | 2.83 | -- | -3.34 | -- | -- | 0.353 | -- | 20.42 | 2641 | -- | -- |
| 462.88 | 1 | 6.41 | -- | 1.17 | -2.19 | -- | -- | -0.111 | 15.2 | 22.1 | 2846 | -- | -- |
| 714.11 | 1.25 | 6.48 | 1.49 | -- | -- | -- | -- | -0.424 | -- | -- | -- | -- | -- |
| 642.88 | 1.19 | 6.51 | -- | 1.5 | -- | -- | -- | -0.558 | 14.9 | -- | -- | -- | -- |
| 541.9 | 1.08 | 6.42 | -- | -- | -2.41 | -- | -- | -0.185 | -- | 22.3 | 2642 | -- | -- |
| 772.74 | 1.3 | 6.51 | -- | -- | -- | -- | -- | -0.589 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 258.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 2 | 258.42 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 3 | 258.55 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 5 | 261.33 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 8 | 262.19 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 10 | 262.61 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 11 | 262.95 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 18 | 264.16 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 24 | 265.17 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 46 | 267.45 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 47 | 267.50 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 9 |
| 89 | 269.59 | temperature | 20 | 4320 | > th | dose dependent | sin | 18 | NA |
| 110 | 270.05 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 21 |
| 122 | 270.36 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 9 |
| 138 | 270.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 20 |
| 165 | 271.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 22 |
| 213 | 271.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 239 | 271.62 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 264 | 271.85 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 18 |
| 272 | 271.89 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 303 | 272.07 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 472 | 273.49 | temperature | 10 | 4320 | > th | dose dependent | sin | 18 | NA |
| 533 | 273.99 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 664 | 274.76 | temperature | 20 | 1440 | > th | dose dependent | sin | 4 | NA |
| 671 | 274.81 | temperature | 15 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 703 | 274.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 739 | 275.13 | temperature | 10 | 1440 | > th | dose dependent | sin | 1 | NA |
| 780 | 275.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 800 | 275.45 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 13 |
| 810 | 275.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 16 |
| 815 | 275.51 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 905 | 276.03 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 20 |