Os08g0379200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein.
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Os08g0379200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.56 | 0.424 | 10.4 | 1.17 | 2.3 | -1.01 | -0.323 | 1.81 | -0.216 | 8.93 | 20.4 | 1224 | 22.4 | 8.67 |
| 95.72 | 0.456 | 10.4 | 0.733 | 2.22 | -0.945 | 0.0958 | -- | -0.233 | 8.89 | 19.7 | 1247 | 22.7 | 8.38 |
| 81.21 | 0.42 | 10.4 | 1.16 | 2.27 | -1 | -- | 1.88 | -0.233 | 8.98 | 20.61 | 1211 | 22.8 | 8.72 |
| 92.69 | 0.448 | 10.4 | 0.723 | 2.32 | -0.965 | -- | -- | -0.336 | 8.94 | 19.7 | 1229 | 22.8 | 7.59 |
| 263.21 | 0.76 | 10.6 | 0.0125 | -- | 1.1 | -- | 0.399 | -0.692 | -- | 21.45 | 1167 | 1.94 | 10.6 |
| 142.15 | 0.559 | 10.5 | 0.17 | 2.15 | -- | 0.00175 | -- | -0.694 | 8.58 | -- | -- | -- | -- |
| 142.15 | 0.558 | 10.5 | 0.17 | 2.15 | -- | -- | -- | -0.694 | 8.58 | -- | -- | -- | -- |
| 123.82 | 0.518 | 10.4 | 0.875 | -- | -2.92 | -- | -- | -0.184 | -- | 21.8 | 874 | 5.7 | 13.8 |
| 99.54 | 0.465 | 10.4 | -- | 2.4 | -0.934 | -- | -- | -0.447 | 9.23 | 19.6 | 1129 | 0.305 | 6.81 |
| 401.78 | 0.937 | 10.6 | 0.178 | -- | -- | -- | -- | -0.674 | -- | -- | -- | -- | -- |
| 142.91 | 0.559 | 10.5 | -- | 2.15 | -- | -- | -- | -0.713 | 8.57 | -- | -- | -- | -- |
| 137.11 | 0.545 | 10.5 | -- | -- | -2.93 | -- | -- | -0.361 | -- | 22 | 834 | 5.92 | 14.2 |
| 402.61 | 0.937 | 10.6 | -- | -- | -- | -- | -- | -0.694 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.41 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 6 | 90.75 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 24 | 91.30 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 3 |
| 27 | 91.37 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 28 | 91.37 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 33 | 91.42 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 43 | 91.58 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 4 |
| 98 | 92.23 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 129 | 92.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 194 | 93.02 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 313 | 93.78 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 15 |
| 324 | 93.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 341 | 93.96 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 385 | 94.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 412 | 94.31 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 421 | 94.35 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 441 | 94.49 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 483 | 94.79 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 770 | 96.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |