Os08g0378100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0378100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.9 | 0.401 | 8.71 | 0.0515 | 0.178 | 0.846 | -0.0848 | 2.31 | -0.381 | 11 | 20.24 | 377 | -- | -- |
| 86.95 | 0.438 | 8.77 | -0.262 | 0.043 | 0.485 | 1.2 | -- | -0.44 | 18.1 | 20.24 | 377 | -- | -- |
| 72.87 | 0.398 | 8.71 | 0.0594 | 0.186 | 0.833 | -- | 2.31 | -0.379 | 11.2 | 20.34 | 399 | -- | -- |
| 88.92 | 0.439 | 8.77 | -0.341 | 0.193 | 0.529 | -- | -- | -0.455 | 11.9 | 20.8 | 400 | -- | -- |
| 74.87 | 0.403 | 8.72 | 0.0391 | -- | 0.841 | -- | 2.28 | -0.383 | -- | 20.27 | 361 | -- | -- |
| 97.36 | 0.463 | 8.75 | -0.142 | 0.0941 | -- | 1.3 | -- | -0.351 | 17.7 | -- | -- | -- | -- |
| 99.6 | 0.467 | 8.74 | -0.144 | 0.199 | -- | -- | -- | -0.344 | 13.6 | -- | -- | -- | -- |
| 90.54 | 0.443 | 8.77 | -0.315 | -- | 0.524 | -- | -- | -0.465 | -- | 20.8 | 248 | -- | -- |
| 91.48 | 0.445 | 8.76 | -- | 0.174 | 0.465 | -- | -- | -0.424 | 12.2 | 20.91 | 384 | -- | -- |
| 102.03 | 0.472 | 8.74 | -0.152 | -- | -- | -- | -- | -0.348 | -- | -- | -- | -- | -- |
| 100.15 | 0.468 | 8.74 | -- | 0.202 | -- | -- | -- | -0.328 | 13.7 | -- | -- | -- | -- |
| 92.65 | 0.448 | 8.75 | -- | -- | 0.452 | -- | -- | -0.402 | -- | 21 | 143 | -- | -- |
| 102.64 | 0.473 | 8.74 | -- | -- | -- | -- | -- | -0.331 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.82 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 11 |
| 8 | 70.29 | temperature | 25.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 28 | 71.09 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 22 |
| 41 | 71.62 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 51 | 72.01 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 11 |
| 55 | 72.14 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 13 |
| 68 | 72.58 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 79 | 72.76 | temperature | 25.0 | 270 | < th | dose dependent | sin | 11 | NA |
| 102 | 73.16 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 17 |
| 103 | 73.16 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 2 |
| 105 | 73.17 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 112 | 73.24 | temperature | 20.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 123 | 73.36 | temperature | 20.0 | 270 | < th | dose independent | sin | 12 | NA |
| 140 | 73.49 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 23 |
| 151 | 73.58 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 165 | 73.65 | temperature | 20.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 169 | 73.68 | temperature | 20.0 | 270 | < th | dose independent | rect. | 19 | 12 |
| 212 | 74.05 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |
| 231 | 74.19 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 14 |
| 276 | 74.48 | temperature | 20.0 | 270 | > th | dose independent | sin | 12 | NA |
| 277 | 74.48 | temperature | 20.0 | 270 | < th | dose independent | rect. | 19 | 23 |
| 283 | 74.51 | temperature | 20.0 | 270 | < th | dose independent | no | NA | NA |
| 292 | 74.54 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 315 | 74.63 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 23 |
| 346 | 74.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 352 | 74.80 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 6 |
| 393 | 75.04 | temperature | 20.0 | 720 | > th | dose independent | sin | 17 | NA |
| 407 | 75.09 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 23 |
| 412 | 75.12 | temperature | 25.0 | 10 | < th | dose dependent | sin | 8 | NA |
| 468 | 75.48 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 19 |
| 516 | 75.73 | temperature | 20.0 | 720 | < th | dose independent | sin | 18 | NA |
| 582 | 76.00 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 586 | 76.01 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 14 | 21 |
| 700 | 76.51 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 701 | 76.52 | temperature | 20.0 | 720 | < th | dose independent | rect. | 9 | 16 |
| 706 | 76.55 | temperature | 20.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 769 | 76.74 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 18 | 13 |
| 787 | 76.81 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 793 | 76.81 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 822 | 76.89 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 874 | 76.98 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 19 | 22 |
| 880 | 76.99 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 22 |
| 881 | 76.99 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 882 | 77.00 | temperature | 15.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 958 | 77.12 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 971 | 77.15 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 4 |