Os08g0377400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exonuclease domain containing protein.
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Os08g0377400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Exonuclease domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.22 | 0.221 | 8.93 | 0.0696 | 0.876 | 0.809 | 0.0465 | -1.06 | -0.149 | 14.6 | 36.6 | 1132 | -- | -- |
| 23.12 | 0.224 | 8.95 | -0.144 | 0.884 | 0.793 | -0.0904 | -- | -0.198 | 14.5 | 84.22 | 1194 | -- | -- |
| 22.23 | 0.22 | 8.93 | 0.065 | 0.877 | 0.809 | -- | -1.03 | -0.15 | 14.6 | 35.77 | 1141 | -- | -- |
| 23.12 | 0.224 | 8.96 | -0.15 | 0.878 | 0.792 | -- | -- | -0.207 | 14.6 | 92.27 | 1175 | -- | -- |
| 64.42 | 0.374 | 8.92 | 0.124 | -- | 1.2 | -- | -0.976 | -0.111 | -- | 44.48 | 1083 | -- | -- |
| 33.06 | 0.27 | 8.99 | -0.384 | 0.97 | -- | -0.0673 | -- | -0.345 | 14.4 | -- | -- | -- | -- |
| 33.07 | 0.269 | 8.99 | -0.386 | 0.97 | -- | -- | -- | -0.346 | 14.4 | -- | -- | -- | -- |
| 65.22 | 0.376 | 8.95 | -0.0768 | -- | 1.19 | -- | -- | -0.164 | -- | 70.8 | 1091 | -- | -- |
| 23.64 | 0.226 | 8.95 | -- | 0.874 | 0.857 | -- | -- | -0.181 | 14.6 | 130.2 | 1178 | -- | -- |
| 88.68 | 0.44 | 8.99 | -0.427 | -- | -- | -- | -- | -0.369 | -- | -- | -- | -- | -- |
| 37 | 0.285 | 8.98 | -- | 0.978 | -- | -- | -- | -0.303 | 14.4 | -- | -- | -- | -- |
| 65.36 | 0.377 | 8.95 | -- | -- | 1.22 | -- | -- | -0.151 | -- | 141.6 | 1091 | -- | -- |
| 93.49 | 0.451 | 8.98 | -- | -- | -- | -- | -- | -0.322 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.67 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 2 | 21.71 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 6 | 21.85 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 8 | 21.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 18 |
| 17 | 21.96 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 32 | 22.08 | temperature | 30 | 720 | < th | dose dependent | sin | 12 | NA |
| 50 | 22.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 21 |
| 92 | 22.33 | temperature | 10 | 720 | > th | dose dependent | sin | 12 | NA |
| 168 | 22.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 171 | 22.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 197 | 22.76 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 204 | 22.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 229 | 22.84 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 11 |
| 235 | 22.86 | temperature | 10 | 1440 | > th | dose dependent | sin | 3 | NA |
| 252 | 22.87 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 282 | 22.89 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 17 |
| 334 | 22.91 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 21 |
| 359 | 22.92 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 19 |
| 407 | 22.93 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 499 | 22.94 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 671 | 23.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 901 | 23.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 8 |
| 958 | 23.16 | temperature | 10 | 1440 | > th | dose dependent | sin | 17 | NA |