Os08g0377100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0377100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 230.2 | 0.713 | 2.82 | 0.126 | 0.03 | 0.328 | 0.27 | -0.128 | -0.0958 | 23.5 | 1005 | 17 | -- | -- |
| 230.29 | 0.707 | 2.82 | 0.123 | 0.0317 | 0.324 | 0.269 | -- | -0.1 | 23.5 | 1005 | 18 | -- | -- |
| 230.48 | 0.707 | 2.83 | 0.11 | 0.0395 | 0.326 | -- | -0.127 | -0.0994 | 1.97 | 1005 | 18 | -- | -- |
| 230.56 | 0.707 | 2.82 | 0.111 | 0.0397 | 0.327 | -- | -- | -0.101 | 2.4 | 1005 | 18 | -- | -- |
| 230.56 | 0.707 | 2.82 | 0.116 | -- | 0.326 | -- | -0.127 | -0.097 | -- | 1005 | 18 | -- | -- |
| 239.14 | 0.725 | 2.86 | 0.125 | 0.0468 | -- | 0.322 | -- | -0.235 | 20.6 | -- | -- | -- | -- |
| 239.47 | 0.725 | 2.86 | 0.115 | 0.0503 | -- | -- | -- | -0.235 | 19.3 | -- | -- | -- | -- |
| 230.65 | 0.707 | 2.82 | 0.113 | -- | 0.323 | -- | -- | -0.102 | -- | 1005 | 18 | -- | -- |
| 230.89 | 0.708 | 2.83 | -- | 0.0418 | 0.328 | -- | -- | -0.113 | 2.49 | 1005 | 18 | -- | -- |
| 239.6 | 0.723 | 2.86 | 0.114 | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
| 239.82 | 0.724 | 2.86 | -- | 0.0492 | -- | -- | -- | -0.247 | 19.5 | -- | -- | -- | -- |
| 230.99 | 0.708 | 2.83 | -- | -- | 0.323 | -- | -- | -0.114 | -- | 1005 | 18 | -- | -- |
| 239.94 | 0.723 | 2.86 | -- | -- | -- | -- | -- | -0.248 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 219.55 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 4 | 220.03 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 65 | 220.03 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 125 | 220.05 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 132 | 220.05 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 140 | 220.06 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 142 | 220.09 | wind | 1.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 150 | 220.34 | wind | 3.0 | 10 | < th | dose dependent | rect. | 12 | 4 |
| 159 | 220.77 | wind | 3.0 | 10 | < th | dose dependent | rect. | 12 | 6 |
| 161 | 220.82 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 170 | 221.50 | humidity | 60.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 181 | 222.30 | wind | 3.0 | 10 | < th | dose independent | rect. | 12 | 4 |
| 189 | 223.13 | wind | 3.0 | 10 | < th | dose independent | rect. | 12 | 7 |
| 193 | 223.35 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 2 |
| 194 | 223.36 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 2 | 2 |
| 195 | 223.37 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 201 | 223.71 | humidity | 80.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 259 | 225.51 | wind | 1.0 | 30 | < th | dose independent | rect. | 15 | 8 |
| 266 | 225.62 | wind | 3.0 | 90 | < th | dose independent | rect. | 13 | 2 |
| 277 | 226.19 | radiation | 40.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 305 | 226.39 | temperature | 20.0 | 90 | < th | dose independent | rect. | 2 | 3 |
| 338 | 226.78 | wind | 3.0 | 10 | < th | dose dependent | rect. | 13 | 9 |
| 343 | 226.83 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 353 | 226.92 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 4 |
| 385 | 227.07 | wind | 1.0 | 30 | < th | dose dependent | rect. | 15 | 7 |
| 389 | 227.11 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 12 | 3 |
| 417 | 227.30 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 436 | 227.33 | humidity | 90.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 440 | 227.33 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 468 | 227.84 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 471 | 227.86 | temperature | 20.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 478 | 227.90 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 14 | 1 |
| 483 | 227.90 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 486 | 227.92 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 504 | 228.04 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 14 | 1 |
| 512 | 228.07 | radiation | 30.0 | 10 | > th | dose independent | rect. | 7 | 2 |
| 530 | 228.09 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 557 | 228.17 | humidity | 80.0 | 90 | > th | dose independent | rect. | 22 | 7 |
| 612 | 228.33 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 2 |
| 613 | 228.33 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 638 | 228.48 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 644 | 228.52 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 662 | 228.58 | temperature | 30.0 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 703 | 228.88 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 704 | 228.88 | wind | 3.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 717 | 229.00 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 12 | 3 |
| 744 | 229.17 | temperature | 30.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 748 | 229.20 | radiation | 20.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 768 | 229.23 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 801 | 229.33 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 22 | 7 |
| 806 | 229.37 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 13 | 1 |
| 837 | 229.52 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 7 |
| 851 | 229.59 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 12 | 2 |
| 872 | 229.61 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 887 | 229.66 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 892 | 229.67 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 17 | 6 |
| 909 | 229.73 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 928 | 229.80 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 22 | 11 |
| 975 | 229.87 | wind | 1.0 | 10 | < th | dose independent | rect. | 22 | 1 |
| 979 | 229.87 | wind | 1.0 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 999 | 229.94 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 7 |