Os08g0374600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor kinase-like protein.
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Os08g0374600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 418.15 | 0.961 | 3.89 | 0.357 | 0.516 | -3.36 | -1.09 | 5.21 | 0.483 | 14.4 | 8.8 | 657 | -- | -- |
| 422.15 | 0.957 | 3.94 | 0.409 | 0.439 | -3.85 | -1.31 | -- | 0.456 | 13.8 | 8.801 | 642 | -- | -- |
| 421.83 | 0.957 | 3.9 | 0.277 | 0.49 | -3.31 | -- | 5.8 | 0.46 | 14.9 | 9 | 618 | -- | -- |
| 422.7 | 0.958 | 3.92 | 0.355 | 0.436 | -4.48 | -- | -- | 0.502 | 15 | 8.886 | 619 | -- | -- |
| 435.84 | 0.972 | 3.9 | 0.283 | -- | -3.54 | -- | 5.83 | 0.443 | -- | 8.907 | 592 | -- | -- |
| 508.79 | 1.06 | 3.96 | 0.000475 | 0.572 | -- | -1.07 | -- | 0.311 | 15.9 | -- | -- | -- | -- |
| 512.04 | 1.06 | 3.97 | -0.0142 | 0.571 | -- | -- | -- | 0.305 | 16.2 | -- | -- | -- | -- |
| 433.98 | 0.97 | 3.93 | 0.397 | -- | -4.95 | -- | -- | 0.453 | -- | 8.5 | 514 | -- | -- |
| 425.03 | 0.96 | 3.94 | -- | 0.467 | -4.61 | -- | -- | 0.404 | 14.8 | 9 | 569 | -- | -- |
| 529.71 | 1.08 | 3.96 | -0.0372 | -- | -- | -- | -- | 0.29 | -- | -- | -- | -- | -- |
| 512.04 | 1.06 | 3.96 | -- | 0.571 | -- | -- | -- | 0.307 | 16.2 | -- | -- | -- | -- |
| 437.3 | 0.974 | 3.94 | -- | -- | -4.98 | -- | -- | 0.404 | -- | 8.796 | 514 | -- | -- |
| 529.75 | 1.07 | 3.96 | -- | -- | -- | -- | -- | 0.294 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 414.82 | wind | 9 | 270 | > th | dose dependent | sin | 10 | NA |
| 2 | 414.85 | radiation | 1 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 3 | 415.33 | radiation | 1 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 5 | 415.40 | radiation | 1 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 8 | 416.10 | radiation | 1 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 12 | 416.71 | wind | 9 | 720 | > th | dose independent | rect. | 20 | 21 |
| 17 | 417.26 | wind | 9 | 720 | < th | dose independent | sin | 0 | NA |
| 18 | 417.29 | wind | 9 | 720 | > th | dose dependent | rect. | 20 | 21 |
| 23 | 417.73 | wind | 9 | 720 | > th | dose dependent | rect. | 10 | 7 |
| 24 | 417.75 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 16 |
| 31 | 417.87 | wind | 9 | 720 | > th | dose independent | rect. | 18 | 19 |
| 35 | 418.06 | wind | 9 | 720 | > th | dose independent | rect. | 9 | 8 |
| 43 | 418.10 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 48 | 418.26 | wind | 9 | 720 | > th | dose independent | sin | 2 | NA |
| 60 | 418.49 | wind | 9 | 270 | > th | dose independent | sin | 10 | NA |
| 71 | 419.12 | wind | 9 | 720 | > th | dose independent | sin | 8 | NA |
| 83 | 419.67 | wind | 9 | 270 | < th | dose independent | sin | 10 | NA |
| 97 | 420.03 | wind | 9 | 720 | > th | dose dependent | rect. | 10 | 16 |
| 105 | 420.07 | wind | 9 | 720 | > th | dose dependent | rect. | 10 | 13 |
| 108 | 420.13 | wind | 9 | 720 | > th | dose dependent | sin | 0 | NA |
| 111 | 420.16 | wind | 9 | 720 | < th | dose independent | no | NA | NA |
| 156 | 420.70 | wind | 7 | 270 | > th | dose dependent | rect. | 14 | 22 |
| 160 | 420.81 | wind | 9 | 720 | > th | dose independent | no | NA | NA |
| 161 | 420.81 | wind | 9 | 720 | > th | dose independent | rect. | 9 | 17 |
| 176 | 420.81 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 22 |
| 193 | 420.81 | wind | 9 | 720 | > th | dose dependent | no | NA | NA |
| 209 | 420.81 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 22 |
| 254 | 420.86 | wind | 9 | 720 | > th | dose independent | rect. | 9 | 14 |
| 283 | 420.88 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 23 |
| 342 | 421.12 | wind | 7 | 720 | < th | dose independent | rect. | 8 | 16 |
| 392 | 421.32 | wind | 9 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 401 | 421.34 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 12 |
| 624 | 422.84 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 12 |
| 743 | 424.81 | wind | 7 | 720 | < th | dose independent | rect. | 10 | 15 |
| 761 | 425.14 | wind | 7 | 720 | < th | dose independent | rect. | 8 | 14 |
| 793 | 426.06 | wind | 7 | 720 | < th | dose independent | rect. | 4 | 16 |
| 820 | 426.47 | wind | 7 | 720 | < th | dose independent | rect. | 8 | 23 |
| 827 | 426.63 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 12 |
| 831 | 426.64 | wind | 7 | 720 | < th | dose independent | rect. | 4 | 18 |
| 864 | 426.92 | wind | 7 | 720 | < th | dose independent | rect. | 6 | 16 |
| 896 | 427.07 | wind | 7 | 720 | < th | dose independent | rect. | 17 | 23 |
| 935 | 427.41 | wind | 7 | 720 | < th | dose independent | rect. | 10 | 8 |
| 955 | 427.64 | temperature | 20 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 957 | 427.69 | wind | 7 | 720 | < th | dose independent | rect. | 10 | 23 |
| 974 | 427.85 | wind | 7 | 720 | < th | dose independent | rect. | 15 | 23 |