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Os08g0369200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Tetratricopeptide-like helical domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.32 (0.0248) R2 : 0.599
β1 : 1.17 (0.0908) R2dD : 0.153 R2D : 0.121
β2 : 1.47 (0.0638) R2dC : 0.466 R2C : 0.445
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.216 (0.0529) R2dN8 : 0.0196 R2N8 : -0.00843
σ : 0.466
deviance : 99.09
__
_____
C
peak time of C : 16.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
86.21 0.436 8.31 1.25 1.38 0.969 0.249 -0.114 0.266 16.7 78 1307 -- --
86.23 0.432 8.31 1.24 1.38 0.961 0.242 -- 0.264 16.7 77.98 1307 -- --
86.38 0.433 8.31 1.25 1.38 0.972 -- -0.0626 0.266 16.7 77.87 1307 -- --
86.38 0.433 8.31 1.24 1.38 0.968 -- -- 0.265 16.7 77.78 1307 -- --
171.34 0.613 8.3 1.06 -- -0.619 -- -0.173 0.194 -- 78 1262 -- --
98.76 0.466 8.32 1.17 1.47 -- 0.354 -- 0.214 16.5 -- -- -- --
99.09 0.466 8.32 1.17 1.47 -- -- -- 0.216 16.5 -- -- -- --
171.53 0.613 8.3 1.06 -- -0.62 -- -- 0.192 -- 78 1262 -- --
121.99 0.514 8.33 -- 1.39 0.982 -- -- 0.147 16.6 83.55 1400 -- --
214 0.684 8.31 1.12 -- -- -- -- 0.177 -- -- -- -- --
135.44 0.544 8.35 -- 1.45 -- -- -- 0.0852 16.6 -- -- -- --
200.9 0.662 8.33 -- -- -0.645 -- -- 0.0759 -- 78 1262 -- --
246.94 0.733 8.33 -- -- -- -- -- 0.0534 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 73.81 temperature 25.0 270 < th dose independent rect. 3 2
2 73.82 temperature 25.0 270 < th dose independent rect. 1 5
5 74.36 wind 5.0 270 < th dose independent rect. 1 5
6 74.39 temperature 30.0 90 < th dose dependent rect. 3 6
7 74.40 wind 5.0 90 < th dose independent rect. 3 5
8 74.40 temperature 25.0 90 < th dose independent rect. 3 5
9 74.43 wind 7.0 90 < th dose independent rect. 8 19
11 74.61 precipitation 0.1 90 < th dose independent rect. 3 5
12 74.61 precipitation 0.1 90 < th dose dependent rect. 3 5
16 75.04 wind 5.0 270 < th dose independent rect. 3 2
17 75.07 temperature 30.0 270 < th dose dependent rect. 3 2
18 75.08 precipitation 0.1 270 < th dose independent rect. 3 2
19 75.08 precipitation 0.1 270 < th dose dependent rect. 3 2
20 75.08 wind 9.0 90 < th dose dependent rect. 8 19
22 75.21 wind 9.0 90 < th dose dependent rect. 3 5
26 75.35 temperature 10.0 90 > th dose dependent rect. 8 19
27 75.38 wind 9.0 270 < th dose dependent rect. 6 19
30 75.43 temperature 10.0 90 > th dose independent rect. 3 5
33 75.43 humidity 50.0 90 > th dose independent rect. 3 5
35 75.43 atmosphere 995.0 90 > th dose independent rect. 3 5
36 75.43 atmosphere 1015.0 90 < th dose independent rect. 3 5
37 75.43 temperature 10.0 90 > th dose independent rect. 8 19
38 75.46 precipitation 0.1 270 < th dose independent rect. 1 5
39 75.46 wind 7.0 270 < th dose independent rect. 6 19
40 75.46 precipitation 0.1 270 < th dose dependent rect. 1 5
41 75.47 precipitation 0.1 10 < th dose independent rect. 3 6
42 75.47 precipitation 0.1 90 < th dose independent rect. 8 19
43 75.47 precipitation 0.1 10 < th dose dependent rect. 3 6
44 75.47 precipitation 0.1 90 < th dose dependent rect. 8 19
46 75.52 temperature 10.0 10 > th dose dependent rect. 8 19
47 75.53 radiation 40.0 90 < th dose independent rect. 3 5
49 75.62 wind 9.0 270 < th dose independent rect. 5 22
60 75.88 wind 9.0 10 < th dose dependent rect. 3 6
62 75.91 temperature 30.0 270 < th dose dependent rect. 1 5
63 75.93 wind 9.0 270 < th dose dependent rect. 6 8
64 75.94 temperature 10.0 270 > th dose dependent rect. 20 15
67 76.01 wind 1.0 270 > th dose independent rect. 3 1
77 76.10 wind 7.0 10 < th dose independent rect. 9 18
78 76.17 radiation 40.0 90 < th dose dependent rect. 3 6
80 76.25 wind 5.0 10 < th dose independent rect. 3 6
87 76.32 wind 9.0 270 < th dose dependent rect. 3 2
93 76.37 atmosphere 1010.0 270 < th dose independent rect. 1 5
94 76.38 temperature 10.0 270 > th dose independent rect. 1 5
97 76.38 humidity 50.0 270 > th dose independent rect. 1 5
100 76.38 atmosphere 995.0 270 > th dose independent rect. 1 5
102 76.38 radiation 20.0 270 < th dose independent rect. 1 5
106 76.38 temperature 10.0 270 > th dose independent rect. 6 19
108 76.40 precipitation 0.1 270 < th dose independent rect. 6 19
109 76.40 precipitation 0.1 270 < th dose dependent rect. 6 19
119 76.47 temperature 10.0 270 > th dose independent rect. 3 2
122 76.47 humidity 50.0 270 > th dose independent rect. 3 2
125 76.47 atmosphere 995.0 270 > th dose independent rect. 3 2
126 76.47 atmosphere 1010.0 270 < th dose independent rect. 3 2
128 76.47 radiation 20.0 270 < th dose independent rect. 3 2
131 76.47 temperature 10.0 270 > th dose independent rect. 5 22
136 76.50 radiation 1.0 270 < th dose dependent rect. 3 2
137 76.50 radiation 40.0 270 < th dose dependent rect. 3 2
147 76.58 radiation 1.0 270 < th dose independent rect. 3 2
153 76.63 radiation 40.0 270 < th dose dependent rect. 1 5
167 76.77 temperature 30.0 90 < th dose dependent rect. 3 8
177 76.89 precipitation 0.1 10 < th dose independent rect. 9 18
178 76.89 precipitation 0.1 10 < th dose dependent rect. 9 18
181 76.95 temperature 10.0 10 > th dose independent rect. 3 6
183 76.95 temperature 30.0 10 < th dose independent rect. 3 6
184 76.95 humidity 50.0 10 > th dose independent rect. 3 6
186 76.95 atmosphere 995.0 10 > th dose independent rect. 3 6
187 76.95 atmosphere 1015.0 10 < th dose independent rect. 3 6
188 76.95 temperature 10.0 10 > th dose independent rect. 9 18
191 76.97 wind 7.0 270 < th dose independent rect. 6 8
192 76.97 wind 9.0 270 < th dose dependent rect. 1 5
215 77.14 temperature 10.0 270 > th dose dependent rect. 6 6
235 77.19 radiation 40.0 90 < th dose dependent rect. 3 8
237 77.20 wind 1.0 270 > th dose independent rect. 1 5
312 77.36 temperature 20.0 270 > th dose independent rect. 6 19
346 77.56 atmosphere 995.0 90 > th dose independent rect. 8 19
347 77.57 temperature 15.0 270 > th dose independent rect. 6 8
350 77.58 precipitation 0.1 270 < th dose independent rect. 5 22
351 77.58 precipitation 0.1 270 < th dose dependent rect. 5 22
430 78.26 humidity 60.0 90 > th dose dependent rect. 21 6
437 78.31 humidity 50.0 90 > th dose dependent rect. 3 5
447 78.38 atmosphere 995.0 90 > th dose dependent rect. 3 5
449 78.39 humidity 50.0 270 > th dose dependent rect. 3 2
453 78.42 radiation 1.0 270 < th dose dependent rect. 2 10
461 78.44 wind 9.0 270 < th dose independent rect. 21 14
465 78.49 wind 1.0 270 > th dose independent rect. 2 3
468 78.51 atmosphere 1015.0 270 < th dose independent rect. 11 10
473 78.53 humidity 50.0 90 > th dose dependent rect. 19 8
484 78.58 temperature 10.0 270 > th dose independent rect. 11 10
485 78.58 temperature 10.0 270 > th dose independent rect. 21 14
486 78.58 atmosphere 995.0 270 > th dose independent rect. 21 14
488 78.59 humidity 50.0 270 > th dose independent rect. 21 14
520 78.76 atmosphere 995.0 10 > th dose independent rect. 9 18
555 78.91 temperature 30.0 90 < th dose dependent rect. 3 16
557 78.93 humidity 80.0 720 < th dose dependent rect. 19 12
579 79.01 humidity 50.0 270 > th dose dependent rect. 19 6
582 79.02 radiation 1.0 270 < th dose independent rect. 1 10
594 79.08 atmosphere 995.0 270 > th dose independent rect. 6 19
619 79.12 atmosphere 995.0 10 > th dose dependent rect. 3 5
623 79.13 temperature 15.0 270 > th dose independent rect. 14 16
635 79.17 precipitation 0.1 270 < th dose independent rect. 6 8
639 79.17 precipitation 0.1 270 < th dose dependent rect. 6 8
643 79.18 humidity 80.0 720 < th dose dependent rect. 19 10
663 79.21 precipitation 0.1 270 < th dose independent rect. 14 16
670 79.21 precipitation 0.1 270 < th dose dependent rect. 14 16
695 79.31 atmosphere 1005.0 90 > th dose independent rect. 3 5
706 79.35 atmosphere 995.0 270 > th dose independent rect. 6 8
707 79.35 atmosphere 1015.0 270 < th dose independent rect. 6 8
712 79.36 radiation 40.0 270 < th dose independent rect. 14 16
713 79.36 precipitation 0.1 270 < th dose independent rect. 1 18
714 79.36 precipitation 0.1 270 < th dose dependent rect. 1 18
732 79.42 temperature 10.0 90 > th dose dependent rect. 8 6
769 79.49 humidity 50.0 270 > th dose dependent rect. 1 5
779 79.53 temperature 30.0 90 < th dose dependent rect. 3 14
783 79.55 atmosphere 1015.0 90 < th dose independent rect. 8 19
791 79.59 humidity 60.0 270 > th dose independent rect. 19 6
794 79.60 wind 9.0 270 < th dose independent rect. 19 6
795 79.60 temperature 10.0 270 > th dose independent rect. 19 6
796 79.60 temperature 30.0 270 < th dose independent rect. 19 6
798 79.60 atmosphere 995.0 270 > th dose independent rect. 19 6
799 79.60 radiation 1.0 270 < th dose independent rect. 19 6
805 79.60 temperature 10.0 270 > th dose independent rect. 1 18
806 79.60 atmosphere 1015.0 270 < th dose independent rect. 1 18
807 79.60 radiation 1.0 270 < th dose dependent rect. 19 6
817 79.62 wind 9.0 270 < th dose independent rect. 14 16
818 79.62 temperature 20.0 270 > th dose independent rect. 20 16
834 79.67 wind 9.0 1440 < th dose independent rect. 4 5
835 79.67 temperature 10.0 1440 > th dose independent rect. 4 5
838 79.67 humidity 50.0 1440 > th dose independent rect. 4 5
840 79.67 atmosphere 995.0 1440 > th dose independent rect. 4 5
841 79.67 atmosphere 1015.0 1440 < th dose independent rect. 4 5
845 79.67 temperature 10.0 1440 > th dose independent rect. 9 19
850 79.67 temperature 10.0 10 > th dose dependent rect. 22 16
860 79.70 humidity 80.0 90 > th dose independent rect. 21 6
890 79.78 precipitation 0.1 270 < th dose independent rect. 2 15
892 79.78 radiation 40.0 90 < th dose independent rect. 3 18
895 79.78 precipitation 0.1 270 < th dose dependent rect. 2 15
897 79.79 temperature 10.0 10 > th dose dependent rect. 8 6
921 79.81 wind 9.0 90 < th dose independent rect. 21 6
922 79.81 temperature 10.0 90 > th dose independent rect. 21 6
923 79.81 temperature 30.0 90 < th dose independent rect. 21 6
924 79.81 humidity 50.0 90 > th dose independent rect. 21 6
927 79.81 atmosphere 995.0 90 > th dose independent rect. 21 6
928 79.81 radiation 1.0 90 < th dose independent rect. 21 6
933 79.81 temperature 10.0 90 > th dose independent rect. 3 18
934 79.81 atmosphere 1015.0 90 < th dose independent rect. 3 18
937 79.81 radiation 1.0 90 < th dose dependent rect. 21 6
951 79.84 humidity 80.0 720 < th dose dependent rect. 20 2
958 79.87 precipitation 0.1 270 < th dose independent rect. 19 6
959 79.87 precipitation 0.1 90 < th dose independent rect. 21 6
961 79.87 precipitation 0.1 270 < th dose dependent rect. 19 6
962 79.87 precipitation 0.1 90 < th dose dependent rect. 21 6
971 79.90 wind 1.0 270 > th dose independent rect. 11 10