Os08g0369000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Permease 1.
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Os08g0369000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Permease 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.35 | 0.496 | 7.21 | -0.487 | 1.18 | -0.552 | 0.623 | -2.15 | 0.0158 | 22.4 | 70 | 1140 | -- | -- |
| 120.1 | 0.51 | 7.18 | -0.335 | 1.1 | -0.535 | 0.115 | -- | 0.0345 | 22.5 | 70 | 1143 | -- | -- |
| 112.72 | 0.494 | 7.21 | -0.486 | 1.16 | -0.532 | -- | -1.93 | 0.027 | 22.5 | 69.79 | 1170 | -- | -- |
| 118.13 | 0.506 | 7.18 | -0.271 | 1.11 | -0.752 | -- | -- | 0.0345 | 22.4 | 68.58 | 2601 | -- | -- |
| 177.32 | 0.62 | 7.17 | -0.465 | -- | -0.509 | -- | -1.84 | 0.03 | -- | 69 | 1586 | -- | -- |
| 134.5 | 0.544 | 7.18 | -0.377 | 0.999 | -- | 0.0345 | -- | 0.0447 | 22.2 | -- | -- | -- | -- |
| 134.5 | 0.543 | 7.18 | -0.379 | 0.999 | -- | -- | -- | 0.0446 | 22.2 | -- | -- | -- | -- |
| 183.23 | 0.63 | 7.13 | -0.253 | -- | -0.608 | -- | -- | 0.122 | -- | 70.72 | 1578 | -- | -- |
| 120.13 | 0.51 | 7.17 | -- | 1.12 | -0.78 | -- | -- | 0.0733 | 22.4 | 68.51 | 2568 | -- | -- |
| 194.94 | 0.652 | 7.15 | -0.365 | -- | -- | -- | -- | 0.0465 | -- | -- | -- | -- | -- |
| 138.28 | 0.55 | 7.17 | -- | 0.997 | -- | -- | -- | 0.0868 | 22.1 | -- | -- | -- | -- |
| 184.83 | 0.633 | 7.13 | -- | -- | -0.707 | -- | -- | 0.125 | -- | 69 | 2994 | -- | -- |
| 198.45 | 0.658 | 7.14 | -- | -- | -- | -- | -- | 0.0869 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 104.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 3 | 104.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 105.89 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 5 | 106.09 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 7 |
| 9 | 106.40 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 9 |
| 15 | 106.80 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 12 |
| 17 | 106.87 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 22 | 107.08 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 26 | 107.27 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 33 | 107.48 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 39 | 107.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 42 | 107.76 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 45 | 107.82 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 52 | 107.92 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 54 | 107.92 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 20 |
| 59 | 107.98 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 66 | 108.11 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 67 | 108.13 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 68 | 108.13 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 83 | 108.26 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 89 | 108.29 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 91 | 108.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 113 | 108.46 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 5 | 10 |
| 118 | 108.51 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 120 | 108.52 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 126 | 108.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 136 | 108.65 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 148 | 108.75 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 149 | 108.75 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 150 | 108.75 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 153 | 108.78 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 158 | 108.81 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 160 | 108.82 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 3 |
| 161 | 108.84 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 17 |
| 163 | 108.85 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 19 |
| 170 | 108.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 173 | 108.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 196 | 109.04 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 6 |
| 203 | 109.08 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 212 | 109.13 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 219 | 109.18 | humidity | 90.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 235 | 109.24 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 242 | 109.27 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 245 | 109.28 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 246 | 109.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 248 | 109.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 255 | 109.31 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 261 | 109.33 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 288 | 109.40 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 2 | 5 |
| 291 | 109.42 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 297 | 109.44 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 308 | 109.46 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 325 | 109.51 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 329 | 109.51 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 6 |
| 338 | 109.54 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 346 | 109.57 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 364 | 109.61 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 391 | 109.66 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 414 | 109.71 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 424 | 109.74 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 425 | 109.74 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 5 |
| 434 | 109.74 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 437 | 109.75 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 1 | 16 |
| 453 | 109.79 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 456 | 109.80 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 461 | 109.80 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 480 | 109.84 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 485 | 109.86 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 495 | 109.87 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 554 | 109.97 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 16 | 12 |
| 597 | 110.04 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 601 | 110.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 629 | 110.10 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 651 | 110.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 657 | 110.14 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 668 | 110.16 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 684 | 110.18 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 11 | 21 |
| 701 | 110.21 | humidity | 90.0 | 14400 | < th | dose independent | sin | 3 | NA |
| 735 | 110.26 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 743 | 110.27 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 17 |
| 744 | 110.27 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 751 | 110.28 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 756 | 110.29 | temperature | 25.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 771 | 110.31 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 773 | 110.31 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 22 |
| 777 | 110.31 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 17 |
| 816 | 110.36 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 20 |
| 827 | 110.38 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 16 | 13 |
| 836 | 110.39 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 14 | 19 |
| 839 | 110.40 | wind | 3.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 845 | 110.40 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 23 |
| 864 | 110.42 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 876 | 110.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 896 | 110.45 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 905 | 110.46 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 945 | 110.50 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 9 |