Os08g0363200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0363200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.21 | 0.399 | 9.61 | -0.101 | 0.998 | -1.61 | 0.271 | -1.26 | 0.463 | 0.504 | 24.99 | 106 | -- | -- |
| 74.1 | 0.401 | 9.64 | -0.259 | 0.967 | -1.48 | -0.0346 | -- | 0.433 | 0.511 | 25.29 | 116 | -- | -- |
| 72.23 | 0.396 | 9.62 | -0.127 | 0.968 | -1.58 | -- | -1.08 | 0.47 | 0.536 | 25 | 139 | -- | -- |
| 73.99 | 0.401 | 9.64 | -0.297 | 0.978 | -1.49 | -- | -- | 0.417 | 0.557 | 25.29 | 128 | -- | -- |
| 99.82 | 0.465 | 9.61 | -0.169 | -- | -1.65 | -- | -1.05 | 0.421 | -- | 26 | 830 | -- | -- |
| 105.99 | 0.483 | 9.57 | 0.0679 | 0.749 | -- | -0.13 | -- | 0.718 | 23.8 | -- | -- | -- | -- |
| 106.07 | 0.482 | 9.57 | 0.073 | 0.749 | -- | -- | -- | 0.718 | 23.8 | -- | -- | -- | -- |
| 100.59 | 0.467 | 9.63 | -0.361 | -- | -1.58 | -- | -- | 0.377 | -- | 26.3 | 828 | -- | -- |
| 76.05 | 0.406 | 9.62 | -- | 0.954 | -1.38 | -- | -- | 0.471 | 0.486 | 25.26 | 132 | -- | -- |
| 141.42 | 0.556 | 9.55 | 0.0953 | -- | -- | -- | -- | 0.728 | -- | -- | -- | -- | -- |
| 106.21 | 0.482 | 9.57 | -- | 0.75 | -- | -- | -- | 0.71 | 23.8 | -- | -- | -- | -- |
| 103.63 | 0.474 | 9.62 | -- | -- | -1.43 | -- | -- | 0.445 | -- | 26.3 | 823 | -- | -- |
| 141.66 | 0.556 | 9.55 | -- | -- | -- | -- | -- | 0.717 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.30 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 2 | 71.36 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 4 | 71.66 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 5 | 71.79 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 3 |
| 10 | 72.19 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 12 | 72.25 | wind | 3 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 14 | 72.28 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 22 | 72.49 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 29 | 72.73 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 32 | 72.78 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 35 | 72.85 | wind | 3 | 14400 | > th | dose independent | rect. | 20 | 11 |
| 41 | 72.94 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 46 | 73.01 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 83 | 73.49 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 119 | 73.96 | wind | 3 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 138 | 74.18 | wind | 3 | 14400 | < th | dose independent | sin | 10 | NA |
| 154 | 74.30 | wind | 3 | 14400 | < th | dose dependent | sin | 10 | NA |
| 155 | 74.32 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 15 |
| 165 | 74.39 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 174 | 74.42 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 203 | 74.59 | wind | 1 | 14400 | > th | dose dependent | rect. | 21 | 10 |
| 218 | 74.69 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 225 | 74.71 | wind | 3 | 14400 | > th | dose independent | sin | 10 | NA |
| 241 | 74.82 | wind | 3 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 266 | 75.01 | wind | 3 | 14400 | < th | dose independent | rect. | 22 | 15 |
| 276 | 75.07 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 313 | 75.23 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 318 | 75.26 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 358 | 75.49 | wind | 9 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 367 | 75.55 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 389 | 75.66 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 393 | 75.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 17 |
| 396 | 75.67 | wind | 3 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 398 | 75.68 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 6 |
| 427 | 75.79 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 522 | 76.17 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 566 | 76.31 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 641 | 76.75 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 713 | 77.04 | temperature | 25 | 720 | < th | dose dependent | sin | 20 | NA |
| 803 | 77.38 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 821 | 77.45 | wind | 1 | 14400 | > th | dose dependent | sin | 9 | NA |
| 822 | 77.45 | wind | 7 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 861 | 77.60 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |
| 931 | 77.86 | temperature | 25 | 270 | < th | dose dependent | sin | 9 | NA |