Os08g0360700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0360700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.39 | 0.478 | 2.84 | 0.347 | 0.0571 | 2.37 | -0.675 | 2.79 | 0.181 | 4.2 | 10.22 | 175 | -- | -- |
| 103.53 | 0.474 | 2.84 | 0.343 | 0.0686 | 1.8 | -0.652 | -- | 0.173 | 4.31 | 10.15 | 172 | -- | -- |
| 104.46 | 0.476 | 2.84 | 0.359 | 0.0657 | 2.5 | -- | 3.92 | 0.182 | 6.99 | 10.1 | 174 | -- | -- |
| 104.74 | 0.477 | 2.83 | 0.344 | 0.0542 | 1.63 | -- | -- | 0.191 | 4.5 | 10.2 | 172 | -- | -- |
| 104.68 | 0.477 | 2.84 | 0.362 | -- | 2.51 | -- | 4.12 | 0.184 | -- | 10.1 | 176 | -- | -- |
| 108.38 | 0.488 | 2.84 | 0.261 | 0.0087 | -- | -0.476 | -- | 0.159 | 3.53 | -- | -- | -- | -- |
| 109 | 0.489 | 2.83 | 0.269 | 0.038 | -- | -- | -- | 0.162 | 8.54 | -- | -- | -- | -- |
| 104.89 | 0.477 | 2.83 | 0.336 | -- | 1.55 | -- | -- | 0.186 | -- | 10.2 | 180 | -- | -- |
| 107.55 | 0.483 | 2.84 | -- | 0.0665 | 1.39 | -- | -- | 0.146 | 6.39 | 10.25 | 175 | -- | -- |
| 109.08 | 0.488 | 2.84 | 0.269 | -- | -- | -- | -- | 0.162 | -- | -- | -- | -- | -- |
| 110.91 | 0.493 | 2.84 | -- | 0.0393 | -- | -- | -- | 0.132 | 8.03 | -- | -- | -- | -- |
| 107.77 | 0.484 | 2.84 | -- | -- | 1.34 | -- | -- | 0.146 | -- | 10.25 | 175 | -- | -- |
| 110.99 | 0.492 | 2.84 | -- | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.81 | wind | 9.0 | 10 | > th | dose dependent | rect. | 17 | 3 |
| 13 | 100.84 | wind | 9.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 104 | 101.33 | wind | 9.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 255 | 102.33 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 263 | 102.44 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 264 | 102.44 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 3 |
| 284 | 102.56 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 332 | 102.80 | wind | 9.0 | 90 | > th | dose independent | sin | 13 | NA |
| 338 | 102.81 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 386 | 102.94 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 2 |
| 415 | 103.01 | wind | 9.0 | 90 | < th | dose independent | sin | 13 | NA |
| 437 | 103.13 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 459 | 103.20 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 460 | 103.20 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 462 | 103.22 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 463 | 103.22 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 464 | 103.22 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 465 | 103.22 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 467 | 103.22 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 469 | 103.22 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 471 | 103.22 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 474 | 103.23 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 496 | 103.23 | wind | 5.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 498 | 103.23 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 512 | 103.24 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 515 | 103.24 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 518 | 103.24 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 520 | 103.24 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 522 | 103.24 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 527 | 103.24 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 530 | 103.24 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 534 | 103.24 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 539 | 103.24 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 577 | 103.29 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 599 | 103.30 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 601 | 103.31 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 690 | 103.47 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 703 | 103.49 | temperature | 25.0 | 90 | < th | dose independent | rect. | 15 | 1 |
| 945 | 103.95 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 1 |