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Os08g0360100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : CRS1/YhbY domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.14 (0.0242) R2 : 0.899
β1 : -1.07 (0.0887) R2dD : 0.0337 R2D : 0.0139
β2 : -- (--) R2dC : -- R2C : --
β3 : -3.29 (0.0542) R2dE : 0.822 R2E : 0.82
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.735 (0.0517) R2dN8 : 0.0598 R2N8 : 0.0339
σ : 0.453
deviance : 94.53
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_____
C
peak time of C : --
E
wheather : radiation
threshold : 13.96
memory length : 167
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 3.78
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
81.03 0.423 9.12 -1.13 2.66 -1.82 -0.673 -1.23 -0.708 13.6 2.593 187 21 --
83.43 0.425 9.12 -1.11 2.66 -1.79 -0.388 -- -0.712 13.6 2.715 181 21.1 --
82.3 0.423 9.11 -1.15 2.71 -1.79 -- -1.2 -0.689 13.7 1.492 191 20.7 --
83.92 0.427 9.12 -1.11 2.67 -1.8 -- -- -0.711 13.6 2.808 181 21.1 --
100.4 0.467 9.16 -1.11 -- -3.24 -- 0.406 -0.738 -- 6.641 194 3.85 --
137.15 0.549 9.13 -1.08 3.51 -- 0.0911 -- -0.684 14.5 -- -- -- --
137.18 0.548 9.13 -1.07 3.51 -- -- -- -0.683 14.5 -- -- -- --
94.53 0.453 9.14 -1.07 -- -3.29 -- -- -0.735 -- 13.96 167 3.78 --
114.14 0.498 9.09 -- 2.44 -1.92 -- -- -0.581 13.4 10 138 22.5 --
862.06 1.37 9.15 -1.22 -- -- -- -- -0.771 -- -- -- -- --
167.62 0.606 9.1 -- 3.54 -- -- -- -0.563 14.5 -- -- -- --
123.78 0.518 9.12 -- -- -3.31 -- -- -0.613 -- 10 186 3.76 --
901.58 1.4 9.12 -- -- -- -- -- -0.635 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 74.96 radiation 10.0 90 < th dose independent rect. 2 5
2 75.40 precipitation 0.1 10 < th dose independent rect. 2 5
3 75.40 precipitation 0.1 10 < th dose dependent rect. 2 5
4 75.49 precipitation 0.1 90 < th dose independent rect. 2 5
5 75.49 precipitation 0.1 90 < th dose dependent rect. 2 5
6 75.58 wind 9.0 270 < th dose independent rect. 5 20
9 75.66 precipitation 0.1 270 < th dose independent rect. 5 20
10 75.66 precipitation 0.1 270 < th dose dependent rect. 5 20
13 75.83 precipitation 0.1 270 < th dose independent rect. 2 2
14 75.83 precipitation 0.1 270 < th dose dependent rect. 2 2
15 75.85 wind 9.0 270 < th dose independent rect. 4 22
18 76.02 radiation 10.0 270 < th dose dependent rect. 1 4
23 76.09 humidity 70.0 90 > th dose independent rect. 2 5
25 76.11 wind 9.0 90 < th dose independent rect. 7 19
26 76.12 temperature 10.0 270 > th dose independent rect. 1 4
28 76.12 temperature 30.0 270 < th dose independent rect. 1 4
29 76.12 humidity 50.0 270 > th dose independent rect. 1 4
32 76.12 atmosphere 995.0 270 > th dose independent rect. 1 4
33 76.12 atmosphere 1010.0 270 < th dose independent rect. 1 4
38 76.12 wind 9.0 10 < th dose independent rect. 7 19
39 76.12 temperature 10.0 270 > th dose independent rect. 5 20
41 76.13 wind 9.0 270 < th dose independent rect. 1 4
45 76.42 wind 9.0 270 < th dose independent rect. 2 2
46 76.42 temperature 10.0 270 > th dose independent rect. 2 2
48 76.42 temperature 30.0 270 < th dose independent rect. 2 2
49 76.42 humidity 50.0 270 > th dose independent rect. 2 2
52 76.42 atmosphere 995.0 270 > th dose independent rect. 2 2
53 76.42 atmosphere 1010.0 270 < th dose independent rect. 2 2
55 76.42 radiation 1.0 270 < th dose independent rect. 2 2
60 76.42 temperature 10.0 270 > th dose independent rect. 4 22
61 76.42 radiation 1.0 270 < th dose dependent rect. 2 2
66 76.45 wind 9.0 90 < th dose dependent rect. 2 5
67 76.46 wind 9.0 10 < th dose independent rect. 2 5
68 76.46 temperature 10.0 10 > th dose independent rect. 2 5
70 76.46 temperature 30.0 10 < th dose independent rect. 2 5
71 76.46 humidity 50.0 10 > th dose independent rect. 2 5
74 76.46 atmosphere 995.0 10 > th dose independent rect. 2 5
75 76.46 atmosphere 1015.0 10 < th dose independent rect. 2 5
76 76.46 radiation 20.0 10 < th dose independent rect. 2 5
79 76.46 temperature 10.0 10 > th dose independent rect. 7 19
80 76.46 precipitation 0.1 10 < th dose independent rect. 7 19
81 76.46 precipitation 0.1 10 < th dose dependent rect. 7 19
94 76.60 temperature 10.0 90 > th dose independent rect. 7 19
117 77.15 precipitation 0.1 270 < th dose independent rect. 4 22
118 77.15 precipitation 0.1 270 < th dose dependent rect. 4 22
119 77.24 humidity 50.0 90 > th dose dependent rect. 2 5
124 77.36 wind 9.0 1440 < th dose independent rect. 3 5
125 77.36 temperature 10.0 1440 > th dose independent rect. 3 5
128 77.36 temperature 30.0 1440 < th dose independent rect. 3 5
132 77.36 humidity 50.0 1440 > th dose independent rect. 3 5
137 77.36 atmosphere 995.0 1440 > th dose independent rect. 3 5
138 77.36 temperature 10.0 1440 > th dose independent rect. 8 19
158 78.29 wind 9.0 270 < th dose dependent rect. 2 2
172 78.55 temperature 10.0 270 > th dose dependent rect. 2 2
176 78.76 humidity 50.0 270 > th dose dependent rect. 2 2
194 79.41 temperature 10.0 10 > th dose dependent rect. 2 5
195 79.43 atmosphere 1015.0 1440 < th dose independent rect. 3 5
247 79.75 radiation 1.0 270 < th dose dependent rect. 1 13
254 79.84 wind 7.0 270 < th dose independent rect. 20 13
268 80.06 radiation 1.0 270 < th dose dependent rect. 1 18
362 80.65 temperature 10.0 270 > th dose dependent rect. 1 4
385 80.78 radiation 10.0 90 < th dose independent rect. 2 9
396 80.97 temperature 10.0 270 > th dose independent rect. 9 11
397 80.97 atmosphere 1015.0 270 < th dose independent rect. 9 11
398 80.97 temperature 10.0 270 > th dose independent rect. 20 13
399 80.97 humidity 50.0 270 > th dose independent rect. 20 13
400 80.97 atmosphere 995.0 270 > th dose independent rect. 20 13
430 81.69 radiation 1.0 270 < th dose independent rect. 1 13
434 81.78 temperature 30.0 270 < th dose independent rect. 20 13
476 82.20 radiation 40.0 270 < th dose dependent rect. 15 14
501 82.46 radiation 1.0 270 < th dose dependent rect. 24 21
506 82.55 precipitation 0.1 270 < th dose independent rect. 20 13
507 82.55 precipitation 0.1 270 < th dose dependent rect. 20 13
527 82.80 radiation 10.0 90 < th dose dependent rect. 3 10
564 83.16 atmosphere 995.0 10 > th dose independent rect. 7 19
566 83.17 radiation 1.0 270 < th dose independent rect. 1 18
574 83.23 wind 1.0 270 > th dose independent rect. 1 4
577 83.27 radiation 10.0 90 < th dose dependent rect. 3 8
634 83.57 radiation 10.0 90 < th dose dependent rect. 3 12
641 83.67 wind 1.0 270 > th dose independent rect. 2 2
731 84.73 wind 9.0 270 < th dose independent rect. 9 11
737 84.79 atmosphere 1015.0 90 < th dose dependent rect. 3 4
738 84.80 radiation 40.0 270 < th dose independent rect. 20 13
796 85.29 atmosphere 995.0 270 > th dose dependent rect. 2 2
809 85.45 precipitation 0.1 270 < th dose independent rect. 9 11
810 85.45 precipitation 0.1 270 < th dose dependent rect. 9 11
854 85.86 atmosphere 1015.0 10 < th dose independent rect. 7 19
855 85.87 radiation 40.0 90 < th dose dependent rect. 11 20
864 85.99 wind 1.0 30 > th dose independent rect. 7 20
865 85.99 temperature 15.0 90 > th dose independent rect. 11 20
881 86.14 atmosphere 995.0 10 > th dose dependent rect. 2 5
885 86.17 atmosphere 995.0 270 > th dose independent rect. 10 10
886 86.18 radiation 40.0 90 < th dose dependent rect. 13 18
912 86.41 atmosphere 995.0 90 > th dose dependent rect. 2 5
913 86.42 radiation 40.0 1440 < th dose independent rect. 3 5
917 86.48 atmosphere 995.0 270 > th dose independent rect. 5 20
942 86.85 temperature 30.0 90 < th dose dependent rect. 3 4
955 87.04 radiation 1.0 270 < th dose dependent sin 4 NA
965 87.15 atmosphere 1015.0 270 < th dose dependent rect. 1 4
971 87.28 wind 9.0 90 < th dose dependent rect. 7 19
996 87.55 wind 1.0 270 > th dose independent rect. 9 11
998 87.59 temperature 10.0 10 > th dose dependent rect. 7 19
1000 87.63 radiation 40.0 270 < th dose independent rect. 11 18