Os08g0359900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0359900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 100.03 | 0.47 | 11.1 | 0.237 | 0.592 | 0.717 | 0.112 | -5.9 | -0.373 | 24 | 0.5 | 3040 | -- | -- |
| 101.85 | 0.47 | 11 | 0.633 | 0.625 | -0.865 | 0.334 | -- | -0.428 | 23.6 | 0.5 | 3008 | -- | -- |
| 100.09 | 0.466 | 11.1 | 0.229 | 0.591 | 0.726 | -- | -5.92 | -0.373 | 23.9 | 0.5 | 3049 | -- | -- |
| 101.29 | 0.469 | 11 | 0.666 | 0.61 | -0.879 | -- | -- | -0.393 | 23.7 | 0.5 | 3006 | -- | -- |
| 122.04 | 0.515 | 11.1 | 0.228 | -- | 0.763 | -- | -5.88 | -0.366 | -- | 0.5 | 3122 | -- | -- |
| 116.5 | 0.506 | 11 | 0.381 | 0.569 | -- | -0.0137 | -- | -0.327 | 23.9 | -- | -- | -- | -- |
| 116.5 | 0.505 | 11 | 0.382 | 0.569 | -- | -- | -- | -0.327 | 23.9 | -- | -- | -- | -- |
| 122.91 | 0.516 | 11 | 0.657 | -- | -0.853 | -- | -- | -0.373 | -- | 0.5 | 2994 | -- | -- |
| 110.95 | 0.491 | 11 | -- | 0.59 | -0.724 | -- | -- | -0.426 | 23.9 | 0.5 | 2325 | -- | -- |
| 136.85 | 0.547 | 11 | 0.399 | -- | -- | -- | -- | -0.32 | -- | -- | -- | -- | -- |
| 120.33 | 0.513 | 11 | -- | 0.573 | -- | -- | -- | -0.37 | 23.9 | -- | -- | -- | -- |
| 133.02 | 0.537 | 11 | -- | -- | -0.611 | -- | -- | -0.421 | -- | 0.5 | 2969 | -- | -- |
| 141.04 | 0.554 | 11 | -- | -- | -- | -- | -- | -0.364 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.35 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 2 | 85.52 | humidity | 80 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 39 | 86.59 | humidity | 90 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 52 | 86.91 | humidity | 80 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 63 | 87.19 | humidity | 80 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 65 | 87.27 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 117 | 88.51 | humidity | 80 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 118 | 88.52 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 160 | 89.26 | temperature | 30 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 161 | 89.28 | temperature | 30 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 166 | 89.40 | temperature | 30 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 168 | 89.41 | temperature | 30 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 170 | 89.42 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 171 | 89.42 | temperature | 30 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 173 | 89.43 | temperature | 30 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 197 | 90.97 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 199 | 90.99 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 200 | 91.01 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 204 | 91.15 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 205 | 91.18 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 216 | 91.61 | wind | 1 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 223 | 91.82 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 224 | 91.83 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 225 | 91.88 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 237 | 92.56 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 10 |
| 248 | 92.92 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 250 | 92.95 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 252 | 93.08 | radiation | 40 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 254 | 93.15 | wind | 1 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 260 | 93.31 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 7 |
| 269 | 93.62 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 287 | 93.71 | radiation | 20 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 323 | 94.05 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 352 | 94.16 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 358 | 94.22 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 15 |
| 377 | 94.25 | wind | 1 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 379 | 94.25 | radiation | 1 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 423 | 94.33 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 18 |
| 424 | 94.34 | radiation | 40 | 43200 | > th | dose independent | sin | 22 | NA |
| 433 | 94.37 | radiation | 40 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 439 | 94.40 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 461 | 94.44 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |
| 630 | 94.65 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 673 | 94.75 | wind | 1 | 43200 | < th | dose dependent | sin | 16 | NA |
| 703 | 94.82 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 18 |
| 830 | 95.05 | radiation | 10 | 43200 | > th | dose independent | rect. | 17 | 14 |