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Os08g0359500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : HSP20-like chaperone domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0155) R2 : 0.736
β1 : 1.21 (0.0566) R2dD : 0.273 R2D : 0.239
β2 : 1.17 (0.0404) R2dC : 0.491 R2C : 0.469
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.148 (0.033) R2dN8 : 0.0155 R2N8 : -0.0156
σ : 0.291
deviance : 38.52
__
_____
C
peak time of C : 17.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.52 0.272 12.7 0.556 1.15 0.252 0.434 -4.67 0.0959 18 32.24 1200 -- --
35.13 0.276 12.7 1.29 1.15 -0.235 0.667 -- 0.122 18 31.6 6903 -- --
33.99 0.272 12.7 0.552 1.15 0.253 -- -4.68 0.0971 18 32.29 1198 -- --
35.52 0.278 12.7 1.27 1.15 -0.252 -- -- 0.111 18 31.4 5554 -- --
102.04 0.47 12.7 0.406 -- 0.308 -- -5.5 0.112 -- 31.4 1263 -- --
37.94 0.289 12.6 1.21 1.17 -- 0.487 -- 0.146 17.9 -- -- -- --
38.52 0.291 12.6 1.21 1.17 -- -- -- 0.148 17.9 -- -- -- --
101.27 0.469 12.6 1.28 -- -0.407 -- -- 0.102 -- 34.3 6976 -- --
51.72 0.335 12.7 -- 1.18 0.795 -- -- -0.224 17.8 7.225 47520 -- --
109.83 0.49 12.6 1.17 -- -- -- -- 0.12 -- -- -- -- --
76.97 0.41 12.7 -- 1.15 -- -- -- 0.013 17.9 -- -- -- --
123.14 0.517 12.7 -- -- 0.77 -- -- -0.24 -- 6.466 47520 -- --
146.08 0.564 12.7 -- -- -- -- -- -0.00983 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.89 radiation 1.0 1440 < th dose independent rect. 11 1
2 30.89 radiation 1.0 1440 < th dose dependent rect. 11 1
3 31.73 humidity 90.0 720 > th dose dependent rect. 22 2
9 32.15 temperature 20.0 270 > th dose dependent rect. 3 2
11 32.20 temperature 20.0 270 > th dose dependent rect. 1 6
15 32.45 temperature 20.0 90 > th dose dependent rect. 3 5
28 32.73 atmosphere 1005.0 10 < th dose dependent rect. 24 10
29 32.74 temperature 25.0 720 > th dose dependent rect. 20 7
40 32.81 temperature 20.0 10 > th dose dependent rect. 3 5
41 32.81 atmosphere 1005.0 90 < th dose dependent rect. 1 8
49 32.88 temperature 20.0 30 > th dose independent rect. 15 18
52 32.89 atmosphere 1005.0 270 > th dose dependent rect. 1 5
53 32.90 humidity 90.0 720 > th dose independent rect. 22 1
61 32.92 atmosphere 1005.0 270 < th dose dependent rect. 1 6
72 32.95 temperature 30.0 10 < th dose dependent rect. 20 8
78 32.99 atmosphere 1005.0 270 > th dose independent rect. 24 7
102 33.07 temperature 20.0 270 > th dose independent rect. 3 2
103 33.07 atmosphere 1005.0 90 > th dose independent rect. 3 5
105 33.08 atmosphere 1005.0 270 > th dose independent rect. 3 2
106 33.08 atmosphere 1005.0 270 > th dose dependent rect. 2 3
107 33.08 atmosphere 1005.0 90 > th dose dependent rect. 3 5
112 33.09 atmosphere 995.0 10 > th dose dependent rect. 20 8
117 33.10 humidity 90.0 720 > th dose dependent rect. 13 13
122 33.12 temperature 30.0 270 < th dose dependent rect. 20 7
123 33.12 humidity 90.0 720 > th dose dependent rect. 15 10
144 33.17 temperature 10.0 720 > th dose dependent rect. 17 7
151 33.18 temperature 30.0 720 < th dose dependent rect. 18 8
172 33.23 atmosphere 1005.0 10 > th dose independent rect. 4 5
174 33.23 temperature 30.0 10 < th dose dependent rect. 22 6
178 33.24 radiation 20.0 1440 < th dose dependent rect. 12 1
193 33.27 atmosphere 1000.0 10 > th dose independent rect. 20 8
223 33.34 atmosphere 995.0 10 > th dose dependent rect. 9 19
225 33.35 temperature 25.0 720 > th dose independent rect. 18 11
249 33.38 temperature 20.0 10 > th dose dependent rect. 24 9
252 33.39 wind 5.0 270 < th dose independent rect. 3 2
255 33.39 atmosphere 1005.0 90 < th dose dependent rect. 3 6
259 33.40 radiation 10.0 1440 > th dose independent rect. 12 1
265 33.40 temperature 15.0 10 > th dose dependent rect. 15 18
267 33.41 wind 5.0 10 < th dose dependent rect. 4 5
276 33.43 wind 3.0 90 < th dose independent rect. 3 5
285 33.44 radiation 20.0 1440 < th dose independent rect. 12 2
286 33.44 wind 3.0 10 < th dose independent rect. 4 5
287 33.44 temperature 20.0 90 > th dose independent rect. 3 5
308 33.46 precipitation 0.1 270 > th dose dependent rect. 2 2
313 33.47 precipitation 0.1 270 > th dose independent rect. 2 2
322 33.48 atmosphere 1005.0 270 < th dose dependent rect. 3 3
325 33.49 temperature 25.0 720 < th dose independent rect. 18 8
334 33.51 temperature 20.0 270 > th dose independent rect. 1 6
335 33.51 temperature 25.0 10 > th dose independent rect. 1 8
339 33.51 temperature 10.0 270 > th dose dependent rect. 15 15
348 33.52 atmosphere 1005.0 10 > th dose dependent rect. 3 5
353 33.53 temperature 25.0 720 > th dose independent rect. 20 2
376 33.56 temperature 20.0 10 > th dose independent rect. 3 6
383 33.57 radiation 10.0 1440 > th dose independent rect. 11 3
396 33.58 temperature 25.0 720 > th dose independent rect. 19 5
400 33.58 wind 5.0 90 < th dose dependent rect. 3 6
410 33.60 humidity 90.0 720 > th dose dependent sin 17 NA
430 33.62 temperature 20.0 30 > th dose independent rect. 17 16
457 33.64 atmosphere 1000.0 270 > th dose independent rect. 19 7
467 33.65 humidity 80.0 270 > th dose independent rect. 3 2
471 33.65 atmosphere 1005.0 270 < th dose dependent rect. 5 1
478 33.66 temperature 20.0 720 > th dose dependent sin 13 NA
480 33.66 atmosphere 1005.0 10 < th dose dependent rect. 4 4
495 33.68 temperature 25.0 720 > th dose independent sin 13 NA
508 33.69 wind 3.0 270 < th dose independent rect. 1 6
521 33.70 wind 7.0 270 < th dose dependent rect. 3 2
553 33.72 temperature 30.0 1440 > th dose dependent rect. 15 3
639 33.78 atmosphere 1000.0 10 > th dose independent rect. 22 6
699 33.82 precipitation 0.1 270 < th dose independent rect. 3 2
703 33.82 temperature 30.0 1440 > th dose dependent sin 12 NA
707 33.82 precipitation 0.1 270 < th dose dependent rect. 3 2
737 33.84 temperature 30.0 270 < th dose dependent rect. 23 1
791 33.87 temperature 25.0 720 < th dose independent sin 13 NA
807 33.88 temperature 30.0 720 < th dose dependent sin 15 NA
832 33.89 temperature 30.0 10 < th dose dependent rect. 18 10
900 33.93 humidity 70.0 1440 > th dose dependent rect. 12 1
924 33.94 temperature 15.0 90 > th dose dependent rect. 17 15
955 33.97 humidity 80.0 1440 > th dose independent rect. 12 2
984 33.99 temperature 10.0 720 > th dose dependent sin 14 NA
994 34.00 humidity 90.0 720 < th dose independent rect. 21 3