Os08g0357300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to BZIP DNA-binding protein.
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Os08g0357300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to BZIP DNA-binding protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 268.68 | 0.77 | 7.12 | -0.374 | 1.82 | 1.28 | -0.492 | 3.53 | 1.18 | 22.5 | 60.29 | 1386 | -- | -- |
| 283.57 | 0.784 | 7.13 | 0.0871 | 1.98 | 1.55 | -0.33 | -- | 1.2 | 22.6 | 51.1 | 1270 | -- | -- |
| 269.15 | 0.764 | 7.13 | -0.32 | 1.91 | 1.31 | -- | 3.37 | 1.18 | 22.7 | 58.42 | 1305 | -- | -- |
| 284.33 | 0.785 | 7.12 | 0.101 | 1.96 | 1.56 | -- | -- | 1.22 | 22.7 | 49 | 1267 | -- | -- |
| 451.16 | 0.995 | 7.08 | 0.00924 | -- | 1.28 | -- | -0.331 | 1.2 | -- | 58.42 | 1305 | -- | -- |
| 335.38 | 0.859 | 7.13 | -0.0179 | 1.77 | -- | -0.727 | -- | 1.16 | 22.3 | -- | -- | -- | -- |
| 337.51 | 0.86 | 7.13 | 0.0111 | 1.77 | -- | -- | -- | 1.16 | 22.3 | -- | -- | -- | -- |
| 451.48 | 0.994 | 7.07 | 0.00029 | -- | 1.27 | -- | -- | 1.2 | -- | 58.42 | 1305 | -- | -- |
| 284.6 | 0.786 | 7.12 | -- | 1.96 | 1.55 | -- | -- | 1.21 | 22.7 | 50 | 1267 | -- | -- |
| 528.17 | 1.07 | 7.08 | 0.0382 | -- | -- | -- | -- | 1.16 | -- | -- | -- | -- | -- |
| 337.51 | 0.859 | 7.13 | -- | 1.77 | -- | -- | -- | 1.16 | 22.3 | -- | -- | -- | -- |
| 451.48 | 0.993 | 7.07 | -- | -- | 1.27 | -- | -- | 1.2 | -- | 58.42 | 1305 | -- | -- |
| 528.21 | 1.07 | 7.08 | -- | -- | -- | -- | -- | 1.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 246.11 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 2 | 249.10 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 3 | 253.81 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 6 | 254.48 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 7 | 255.28 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 8 | 255.54 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 9 | 256.17 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 11 | 256.45 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 23 | 257.49 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 25 | 257.54 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 29 | 257.56 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 16 |
| 61 | 258.12 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 69 | 258.19 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 75 | 258.27 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 94 | 258.48 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 102 | 258.60 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 4 | NA |
| 125 | 258.94 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 126 | 258.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 127 | 258.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 137 | 259.03 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 138 | 259.03 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 172 | 259.54 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 210 | 259.88 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 236 | 260.20 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 9 | 18 |
| 279 | 260.45 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 310 | 260.59 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |
| 312 | 260.60 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 335 | 260.70 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 367 | 260.96 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 374 | 261.08 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 417 | 261.76 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 421 | 261.82 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 24 | 12 |
| 441 | 262.21 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 486 | 262.80 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 24 | 12 |
| 498 | 262.92 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 521 | 263.23 | temperature | 25.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 527 | 263.26 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 3 | 12 |
| 530 | 263.26 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 20 | 19 |
| 607 | 263.70 | wind | 3.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 639 | 263.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 11 |
| 646 | 264.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 11 |
| 648 | 264.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 11 |
| 657 | 264.09 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 715 | 264.35 | temperature | 25.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 717 | 264.37 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 765 | 264.60 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 10 |
| 808 | 264.75 | temperature | 30.0 | 14400 | < th | dose independent | sin | 2 | NA |
| 819 | 264.82 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 832 | 264.88 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 925 | 265.14 | wind | 3.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 960 | 265.24 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 998 | 265.36 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 23 | 22 |