Os08g0355100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os08g0355100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.15 | 0.556 | 5.32 | -0.487 | 0.679 | 0.821 | -0.102 | 0.563 | 0.211 | 16 | 66.27 | 864 | -- | -- |
| 140.7 | 0.552 | 5.32 | -0.439 | 0.636 | 0.846 | -0.105 | -- | 0.224 | 16 | 66 | 911 | -- | -- |
| 140.18 | 0.551 | 5.32 | -0.487 | 0.681 | 0.824 | -- | 0.559 | 0.209 | 16 | 66 | 862 | -- | -- |
| 140.69 | 0.552 | 5.32 | -0.441 | 0.598 | 0.821 | -- | -- | 0.225 | 15.8 | 66 | 958 | -- | -- |
| 155.45 | 0.581 | 5.3 | -0.462 | -- | 1.1 | -- | 0.136 | 0.266 | -- | 65.29 | 1121 | -- | -- |
| 150.96 | 0.576 | 5.33 | -0.448 | 0.721 | -- | 0.0455 | -- | 0.153 | 14 | -- | -- | -- | -- |
| 150.97 | 0.575 | 5.33 | -0.446 | 0.721 | -- | -- | -- | 0.154 | 14 | -- | -- | -- | -- |
| 155.47 | 0.581 | 5.31 | -0.454 | -- | 1.11 | -- | -- | 0.248 | -- | 65 | 1122 | -- | -- |
| 145.16 | 0.561 | 5.31 | -- | 0.566 | 0.767 | -- | -- | 0.254 | 14.6 | 61 | 1159 | -- | -- |
| 182.21 | 0.631 | 5.33 | -0.476 | -- | -- | -- | -- | 0.137 | -- | -- | -- | -- | -- |
| 156.22 | 0.585 | 5.31 | -- | 0.73 | -- | -- | -- | 0.203 | 14 | -- | -- | -- | -- |
| 160.85 | 0.591 | 5.3 | -- | -- | 1.12 | -- | -- | 0.279 | -- | 62.63 | 1127 | -- | -- |
| 188.19 | 0.64 | 5.32 | -- | -- | -- | -- | -- | 0.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.75 | wind | 1 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 2 | 133.86 | wind | 1 | 270 | < th | dose independent | rect. | 22 | 1 |
| 3 | 134.49 | wind | 7 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 4 | 134.70 | wind | 7 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 11 | 135.18 | wind | 7 | 4320 | > th | dose independent | rect. | 6 | 8 |
| 18 | 135.36 | wind | 7 | 4320 | > th | dose dependent | rect. | 9 | 5 |
| 23 | 135.44 | wind | 3 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 126 | 136.78 | wind | 5 | 43200 | < th | dose dependent | rect. | 24 | 9 |
| 167 | 137.01 | humidity | 80 | 720 | < th | dose independent | rect. | 18 | 1 |
| 170 | 137.02 | wind | 3 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 172 | 137.02 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 9 |
| 185 | 137.08 | wind | 7 | 4320 | > th | dose independent | sin | 3 | NA |
| 190 | 137.10 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 193 | 137.11 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 196 | 137.12 | wind | 7 | 4320 | < th | dose independent | sin | 3 | NA |
| 197 | 137.12 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 4 |
| 198 | 137.12 | wind | 3 | 43200 | > th | dose independent | rect. | 24 | 9 |
| 201 | 137.12 | wind | 7 | 4320 | > th | dose dependent | sin | 3 | NA |
| 220 | 137.19 | wind | 1 | 30 | < th | dose dependent | rect. | 22 | 4 |
| 239 | 137.24 | wind | 1 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 244 | 137.26 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 252 | 137.27 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 4 |
| 253 | 137.27 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 272 | 137.31 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 13 |
| 294 | 137.34 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 11 |
| 297 | 137.34 | wind | 9 | 43200 | < th | dose dependent | rect. | 24 | 13 |
| 299 | 137.36 | wind | 1 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 315 | 137.38 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 431 | 137.57 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 10 |
| 439 | 137.59 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 479 | 137.65 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 625 | 137.89 | temperature | 30 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 654 | 137.94 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 670 | 137.96 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 4 |
| 699 | 138.00 | wind | 1 | 43200 | > th | dose dependent | sin | 7 | NA |
| 725 | 138.04 | wind | 9 | 43200 | < th | dose dependent | sin | 7 | NA |
| 815 | 138.19 | radiation | 40 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 844 | 138.21 | humidity | 60 | 1440 | > th | dose dependent | rect. | 1 | 13 |
| 858 | 138.24 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 861 | 138.24 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 863 | 138.25 | humidity | 80 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 905 | 138.32 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 950 | 138.41 | humidity | 90 | 720 | < th | dose dependent | sin | 10 | NA |